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scnpilot_p_inoc_scaffold_2480_4

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(2608..3342)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 236.0
  • Bit_score: 363
  • Evalue 2.00e-97
regulatory protein tetr id=12552880 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 236.0
  • Bit_score: 361
  • Evalue 5.30e-97
  • rbh
regulatory protein tetr similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 230.0
  • Bit_score: 357
  • Evalue 2.80e-96

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGACCCAGACCCCCGCCCCCCGCCAGCGCCCCTCCCAGGCCGAGCCCTCGACGCGCTCGCCCTGGGCCCGCAGCATGGACCGCGAGCAGCAGCGCGAGGCCAAGCGCAACGCCGTGCTGCAGGCGGCGGCCGAGCTGTTCAATGAGCGGGGCTTCCATGCGACCTCGCTGGACGACATTGCCGCGCGCCTGCACGTGAGCAAGCCCACGCTGTACTACTACGTGAAGAACAAGGACGAGATCCTGCTGCAATGCGTGAACCAGGGCCTGGCCATGACGCTGGAGGGCATCGAGGCCTCGCGCGCGGCGGGCGGCAACGCCGTGGACCAACTGCGCGCCTGCATGCAGGTGTACGCGGGCATCGTCATGCAGCCCTTCGGCATGTGCCTGATCCGCGTGGGCGACGAGGAGGTGCCCGAGCCCAGCCGCAGCGAGCTGCGCCGCATGAAGTCCGAGATCGACCTGGCCTTCCGCCGCCTGGTGGCGCAGGGCGTGCGGGAAGGCTCGCTCGCGCCCTGCGACCCGAAGATGACGGCTTTCGTCATCGCCGGCGCCCTGAGCTGGATCGGGCGCTGGTACCAGAGCGGCGGCGAGTACAGCCCGGCGCAGGTGGCCGACCAGTGCGTCACCACGCTGCTGCACGGCGTGCTGGGCCAGGCCGCTGCACCCCCGGCCGCCGCGGCCAGGCCTGCGCGCAAGGCGCGCAAACCGCTTTCGCGGGCTGTGGGCGATTGA
PROTEIN sequence
Length: 245
MTQTPAPRQRPSQAEPSTRSPWARSMDREQQREAKRNAVLQAAAELFNERGFHATSLDDIAARLHVSKPTLYYYVKNKDEILLQCVNQGLAMTLEGIEASRAAGGNAVDQLRACMQVYAGIVMQPFGMCLIRVGDEEVPEPSRSELRRMKSEIDLAFRRLVAQGVREGSLAPCDPKMTAFVIAGALSWIGRWYQSGGEYSPAQVADQCVTTLLHGVLGQAAAPPAAAARPARKARKPLSRAVGD*