ggKbase home page

scnpilot_p_inoc_scaffold_3256_4

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(2575..5517)

Top 3 Functional Annotations

Value Algorithm Source
Restriction endonuclease subunit R {ECO:0000313|EMBL:KJA11913.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax t similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 991.0
  • Bit_score: 1694
  • Evalue 0.0
DNA/RNA helicase, superfamily II id=12494250 bin=THIO_HI species=Rhodanobacter denitrificans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 978.0
  • Bit_score: 1555
  • Evalue 0.0
type III restriction protein res subunit similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 979.0
  • Bit_score: 1439
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2943
ATGCGCGATGAATCTCCCATGGCTTTGGTCAGCGGCCTGACCACGCGCACCCAGCAGCTCTGCCTGGGCCTGGAACATGGCGCCGCCGACCTGCTGGAACTCGTCACGCCCACCACAGCCGAGCTGCTGCTGTGGTGGTTTGGCCAGGACATGGTCGATACGCGCAGCGGGCTGAATTTTCACGCCGGGCAAAAGCAGGCCATCCTGAACGCCATCGTGGCGCACGAGGTGCTGGGCGCTGCATCCCTGCTGGACTTGTACCAGCAGGTGGCGCCCGATGCACTGCTGGCGGGCAACCGGCTGGCCGAGGTCTCAAGCGCGAAGCACGCGCACCCCAAATACTGCTTCAAGATGGCCACGGGCACGGGCAAAACCTGGGTGTTGCAGGCGCTGTTGATCTGGCAGTTGCTGAACAAAAACGCAGCGCTGGCCGAGGGGCTGGACGACGCCCGCTTTACGCGCCAGTTCATGGTGGTGGCGCCGGGGCTGATTGTTTACGAGCGGCTGCTGGATGCGTTTTGCGGAAAACTGATAGCAGGAAGCGCAAGCGGGGCGAGAGATTTCGCCACTTCCGACATGGCGCAGTTTGCCGACCTGTTCATCCCCGAGGCGCACCGCGACGCAGTGTTTGCCTTTGTGCGCGGCAATGTGTGCAGCAAGGGCGAGATCGGCCTGAAAGCCACGGGCAACGGCATGATCGCCATCACTAACTGGCATTTGCTGGCCGAGGGCGAGGTGGCAGACGACATAGAAGAAGTGCAAGCGCCCGGCGCGCCGCTGGAGCCGCAGCAGGTGGTAAACGCCGTGTTGCCCCTGACGCCTGGCCGCGCCACGGGCAACAGCCTGGACGTGCTGGACCGCCGCTATGCGCGCGGCAATGTGCTGGAGTTTCTGGCCCAGCTCCCCGAGCTGATGGTGTTCAACGATGAGGCGCACCACATCCACGAGTTCAAGCGCGAGGGCGAGGTGACGGAAGTGGAGTGGCAAAAGAGCCTGAGCCGCATCGCCGAAACCAAGGGCCGGCGCTTTGTGCAGGTGGACTTTTCTGCCACGCCGTACAACGACGTGGGCAGCGGAAAAAACAAGAAAAAACTGTACTTTGCGCACATCGTGACCGACTTTGACCTGAAGGCCGCCATGCGCGCCGGGCTGGTCAAGTCTTTGGTGCTGGACCGGCGCAAGGAGATTGGTGCACTGCCGCTGGAGTTCAAAGCCGAGCGCGATGAAGCAGGCAACCCGGCCCTGAGCGAAGGCCAGCGCGTGATGCTGCGCGCGGGGCTGAAAAAGCTGCGCAAGCTCGAAGCCGACTTTGCCCGCATCGACCCTGCCCGCCACCCCAAGATGCTGGTGGTGTGCGAGGACACCACGGTGTCACCCTTGGTGGCGACGTTCCTGCAAGACCAGGAAGGTTTGAACGCCGACGAGGTGATGACCATTGACTCGGGAAAGAAGGCCGAGCTGGGCGAGAAGGACTGGGCGCCGGTGCGCGAACGGCTGTTCAGCGTGGACAAACATGCCACGCCGCGCGTGATCGTCAGCGTGCTGATGCTGCGCGAAGGCTTTGACGTGAACAACATTTGCGTCATCGTGCCGCTGCGCAGCTCGCAAGCGCAAATTTTGCTGGAACAGACCATTGGCCGGGGCCTGCGGCTGATGTGGCGCGACGCTGAATACGCCGACCTGAAACGCGAGAACCGCGAGCGCATCAACGCCGGGCAGGAACCGGCCAACCTGATCGATGTGCTGAGCATCGTCGAGCACCCGGCCTTCCAGTCGTTTTACGACGAGCTGCTGAATGAAGGCGTGGCGGGCACCACGGGCGACAGCATGGACGACACCTCCAGCACCGGAGACGTGATCGCCGCCGAGCTGCGCGAGGGCTTCGAGGCGTTTGACTTTGGCATTCCATTCATCTTGCGCGAGGCGGACGAGCTGCGCGACCATGCCGCCGTGGATGTGTTGGCCCTTCCCACCTTCACGGCGATGTCGGCAGACGCCTTGCACGATTTGCTGGGCAAGGGCGACACCTTCATCTCGCAAGACCTGCAAAGCGCCACGCTGTTTGGCGACTACCGCGTGGACGGCGCGGTGATGAACGTGGGCGGCTACAACGATTATTTGTCGCGCCTGACGCGGCGCATCAGCCAGGCGCTGAGCGAGCCGCTGCCCAAAGGCAACAAGATTGCCACGCACCTGGCCAAGCCCTACTTGCAGGTCAATACCGCCGATTTGACTGGCTGGCTGGACGACTACATCTGGACGCGGCTTTTTGGCGCGGCCTTCAACCCGCTGGAAGATGAAAACTGGCGCCTGTTGCTGCTGCAGCCGGTGGTGGAGCACATCACCAAGGTATTTGCCGTGGCGTTGCTCGAATCCGAAGAGCAGCACCCCAGCGGCCACACCGAGGTGCACGCGCGCTACCTGAGCGAAGTGCCGCGCCTGATGCTGCGCGAGGCCCATTCGGTGGAGGTGAGCAAGTGCATCTACACCCGCCTGGGCTGGCCCGCGCGCAATGGCGGGCTGGAGCGCACCTTCATCCACTGGGCGCAGGCTGATAGCCAGGTGCTGGCGTTTTGCAAGATCAGCGAAAACCGCCACACTTTTGCCCGCCTGCGCTATGTGAAGGACGATGGCCTGCCCGCGTTCTATTCACCCGACTTTCTGGTGCGCACGGCCAACGCCATCTTTCTGGTGGAAACCAAGGCGCAGCAGCAGGCCATTCACCCGAACGTGCAGCGCAAACTGAAAGCGGCCATCGCGTGGTGTGAGCGCATCAATGCCCTGGCCCCAGAGCACCGGCAGGGCTTGCCCTGGCATTACGTGCTGCTGGCAGAGAACGTGGTGCACGAATGGCAGGCCAAAGGGGCACACCTGGCAGAGTTGCTGGACTATGCAAGGCTGCGGCCGCTGGCCAGCGCATCGCTACAAGCCAGTTTGCTTTGA
PROTEIN sequence
Length: 981
MRDESPMALVSGLTTRTQQLCLGLEHGAADLLELVTPTTAELLLWWFGQDMVDTRSGLNFHAGQKQAILNAIVAHEVLGAASLLDLYQQVAPDALLAGNRLAEVSSAKHAHPKYCFKMATGTGKTWVLQALLIWQLLNKNAALAEGLDDARFTRQFMVVAPGLIVYERLLDAFCGKLIAGSASGARDFATSDMAQFADLFIPEAHRDAVFAFVRGNVCSKGEIGLKATGNGMIAITNWHLLAEGEVADDIEEVQAPGAPLEPQQVVNAVLPLTPGRATGNSLDVLDRRYARGNVLEFLAQLPELMVFNDEAHHIHEFKREGEVTEVEWQKSLSRIAETKGRRFVQVDFSATPYNDVGSGKNKKKLYFAHIVTDFDLKAAMRAGLVKSLVLDRRKEIGALPLEFKAERDEAGNPALSEGQRVMLRAGLKKLRKLEADFARIDPARHPKMLVVCEDTTVSPLVATFLQDQEGLNADEVMTIDSGKKAELGEKDWAPVRERLFSVDKHATPRVIVSVLMLREGFDVNNICVIVPLRSSQAQILLEQTIGRGLRLMWRDAEYADLKRENRERINAGQEPANLIDVLSIVEHPAFQSFYDELLNEGVAGTTGDSMDDTSSTGDVIAAELREGFEAFDFGIPFILREADELRDHAAVDVLALPTFTAMSADALHDLLGKGDTFISQDLQSATLFGDYRVDGAVMNVGGYNDYLSRLTRRISQALSEPLPKGNKIATHLAKPYLQVNTADLTGWLDDYIWTRLFGAAFNPLEDENWRLLLLQPVVEHITKVFAVALLESEEQHPSGHTEVHARYLSEVPRLMLREAHSVEVSKCIYTRLGWPARNGGLERTFIHWAQADSQVLAFCKISENRHTFARLRYVKDDGLPAFYSPDFLVRTANAIFLVETKAQQQAIHPNVQRKLKAAIAWCERINALAPEHRQGLPWHYVLLAENVVHEWQAKGAHLAELLDYARLRPLASASLQASLL*