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scnpilot_p_inoc_scaffold_153

Search features with annotation key words

Displaying items 121-150 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_153_121
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(138096..138896)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BBC59 rbh
Permease {ECO:0000313|EMBL:KIA96583.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_153_122
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

139088..139732
DNA (645bp) protein (215aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ08_CHIPD
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIA96761.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_153_123
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(139750..140139)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRE5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64384.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_153_124
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(140171..140383)
DNA (213bp) protein (71aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" so
Histidine kinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG12_9BACT
two-component hybrid sensor and regulator
scnpilot_p_inoc_scaffold_153_125
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(140562..141893)
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0X7_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95432.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_153_126
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(141940..144732)
DNA (2793bp) protein (931aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0X6_DYAFD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT95431.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_153_127
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(144822..145562)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0X5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95430.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_153_128
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

146064..146621
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSC8_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03473.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_p_inoc_scaffold_153_129
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

146638..148806
DNA (2169bp) protein (723aa)
Sodium/hydrogen exchanger n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSC9_PEDHD rbh
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACU03474.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepa
scnpilot_p_inoc_scaffold_153_130
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

149102..149557
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5C9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94147.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_153_131
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(149596..150711)
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHH3_SPILD rbh
RND transporter
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB38633.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" sourc
scnpilot_p_inoc_scaffold_153_132
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(150721..153972)
DNA (3252bp) protein (1084aa)
acriflavin resistance protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037BBDA8 rbh
Acriflavin resistance protein {ECO:0000313|EMBL:ADB38634.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma l
acriflavin resistance protein
scnpilot_p_inoc_scaffold_153_133
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(153990..155393)
DNA (1404bp) protein (468aa)
Outer membrane efflux protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KHM5_9BACT rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:CCH03628.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_153_134
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(155683..157053)
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" so
Histidine kinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG12_9BACT
histidine kinase
scnpilot_p_inoc_scaffold_153_135
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(157044..157724)
DNA (681bp) protein (227aa)
PhoB family transcriptional regulator n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D6318
Transcriptional activator protein czcR {ECO:0000313|EMBL:CCH54790.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3
hypothetical protein
scnpilot_p_inoc_scaffold_153_136
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

157980..158720
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0X5_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95430.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_153_137
unknown

Not on your lists

comp(158769..159272)
DNA (504bp) protein (168aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_153_138
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(159276..159662)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00035D5FB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG59424.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
scnpilot_p_inoc_scaffold_153_139
unknown

Not on your lists

comp(159733..160008)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_153_140
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(160051..161193)
DNA (1143bp) protein (381aa)
Membrane fusion protein mtrC n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG17_9BACT rbh
Membrane fusion protein mtrC {ECO:0000313|EMBL:CCH52842.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_153_141
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(161141..164347)
DNA (3207bp) protein (1069aa)
Nodulation protein nolG n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG16_9BACT rbh
Nodulation protein nolG {ECO:0000313|EMBL:CCH52841.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_153_142
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(164372..165748)
DNA (1377bp) protein (459aa)
Outer membrane efflux protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG15_9BACT rbh
Outer membrane efflux protein {ECO:0000313|EMBL:CCH52840.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_153_143
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(165753..166199)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000378CDC1
histidine kinase
Response regulator rcp1 {ECO:0000313|EMBL:CCH53813.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
scnpilot_p_inoc_scaffold_153_144
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

166313..166990
DNA (678bp) protein (226aa)
Transcriptional regulatory protein cusR n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG13_9BACT
Transcriptional regulatory protein cusR {ECO:0000313|EMBL:CCH52838.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ
transcriptional regulator
scnpilot_p_inoc_scaffold_153_145
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

166987..168369
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" so
Histidine kinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG12_9BACT rbh
histidine kinase
scnpilot_p_inoc_scaffold_153_146
unknown

Not on your lists

169038..169373
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_153_147
unknown

Not on your lists

comp(170211..170474)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_153_148
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(170598..170831)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003677757
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95016.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_153_149
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

171457..171819
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YH07_9SPHI
Response regulator receiver protein {ECO:0000313|EMBL:EHQ27416.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source=
response regulator receiver protein
scnpilot_p_inoc_scaffold_153_150
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

171831..172340
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B7569B
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27415.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
hypothetical protein
Displaying items 121-150 of 163 in total

View Taxonomy