ggKbase home page

scnpilot_p_inoc_scaffold_5_5

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(5253..5663)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B2_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 138.0
  • Bit_score: 215
  • Evalue 3.40e-53
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 138.0
  • Bit_score: 215
  • Evalue 9.70e-54
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACT92216.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 138.0
  • Bit_score: 215
  • Evalue 4.80e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 411
ATGACAAAACACATCCACCACGGCCGGAACATCAAGCGCTTTCGGGAAATGTTGGGAATCAAGCAGGAAGGCTTAGCCTTCGAGCTTGGCGGGGAATGGTCTCAAAAGAGGGTTTCGCTACTTGAGCAGAAGGAAGTCGTTGAACAGGAAATCCTGGATCAGGTTGCTCAGATACTGAAGGTTCCCACAGAAGCAATCAAAAACTTCAGCGAAGAAGCGGCAATAAACATTATCGCCAGTACCTTGAATGATAATGCAGGATCGATAAATAACAACTGCACCATCAACTTTAATCCTATTGAAAAGTGGGTCGAGGCTTTGGATGAAAATCGAAAGCTTTATGAACGTTTACTTGCGTCCGAACAAGAGAAAGTTGAGCTACTCAAGCGACTGTTTGAAAATTCAAAATAA
PROTEIN sequence
Length: 137
MTKHIHHGRNIKRFREMLGIKQEGLAFELGGEWSQKRVSLLEQKEVVEQEILDQVAQILKVPTEAIKNFSEEAAINIIASTLNDNAGSINNNCTINFNPIEKWVEALDENRKLYERLLASEQEKVELLKRLFENSK*