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scnpilot_p_inoc_scaffold_5_14

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 13236..13817

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Dyadobacter beijingensis RepID=UPI00036F0299 similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 193.0
  • Bit_score: 339
  • Evalue 2.20e-90
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 192.0
  • Bit_score: 339
  • Evalue 6.30e-91
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT92225.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 192.0
  • Bit_score: 339
  • Evalue 3.10e-90

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGAATGCAATTACCAAAAAGAACTACCGCACGCTGACCGAACTGGTCAGGGCTTGCCAGAACAACGACCCTCGCGCCCAAACGCTTTTCTACAACAAATTCCGCACGGAGCTTATGCGTATTTGCGCCCGCTTCGCCCGCACACGCATGGAAGCGGAGGACATTTATCAGGAGTCGTTTGTGAAGATTTTCAGGCATATCCACGATGTGCAAAACCTGGAATCGATCGAATCGTGGATGCGATCGGTCGTCACACGGACGGCGATCAACTACTACCACCGCACGACCAAAAAAGAAGCCTTGCACCATTCGATGGACATGTCGCCGATGGATTTCGAATCAAACGACCATATCTGTATGCTGGACAGGCTTAGCGCCCCGGTGATCGATGAAATGATCGCACAACTGCCGGAGGGCTACAAGAAGATCGTAAACCTGCACCTGATAGACGGCTATTCGCACATCGAAATAGCCCGAAGACTCTCCATTACCGACAGCACTTCACGGTCGCAGCTGCTTCGCGGGCGAAACCTTCTCATGAAAAAATTGAGGAAGCAGGGGATTTCGGGCTACGAGATGTGA
PROTEIN sequence
Length: 194
MNAITKKNYRTLTELVRACQNNDPRAQTLFYNKFRTELMRICARFARTRMEAEDIYQESFVKIFRHIHDVQNLESIESWMRSVVTRTAINYYHRTTKKEALHHSMDMSPMDFESNDHICMLDRLSAPVIDEMIAQLPEGYKKIVNLHLIDGYSHIEIARRLSITDSTSRSQLLRGRNLLMKKLRKQGISGYEM*