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scnpilot_p_inoc_scaffold_5_19

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(17164..18597)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3C5_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 94.5
  • Coverage: 477.0
  • Bit_score: 894
  • Evalue 3.40e-257
  • rbh
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 477.0
  • Bit_score: 894
  • Evalue 9.60e-258
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACT92229.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dya similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 477.0
  • Bit_score: 894
  • Evalue 4.80e-257

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1434
ATGCGAAATAAGAGAATATTGAACTGGGCCGGCATCGCCTTCATCGGGCTGACCTACTCGGCCTGTAATATACCGACGATGCCCCAGAAAACGGAAAACCGGGCGGTACCTGTGAGCTATAACGGCTCACAGGATTCGACCAACACCGGAAAGTTAAGCTGGAAATCGTTTTTCACAGATCCTAACCTGAATGCGCTGATCGATACGGCATTCAGAAACAACCAGGAGCTGAATATTACCATGCAGGAGATCGCTATCTCGCAAAACGAGATCGGCGCCCGCAAAGGGGAATACCTGCCCTTCATCGGCCTGCGCGGCGGTGCGGGTGTTGAAAAAGCGGCACGCTACACCAACATCGGTGCCAGCGAAGCGACTACCGACATCAAGCCCGGCAGGGAGACACCCGACCCGCTGCCGGATGTGAACATTCAGGCGGTGGCAAGGTGGGAAGTGGATATCTGGCACAAGCTGCGGAATGCAAAAAAGGCCGCAGCAACGCGCTACCTGTCATCGATCGAAGGCAAGAACTTCATGATGACCAACCTGGCAGCCGAAATCGCCAATTCCTACTACGAGCTGCTCGCGCTGGATACGCAGCTGGCCATTATCCGCCAGAACATCGACATCCAGAACAATGCGCTCAAGATCGTCAGAATGGAGAAAGAAGCAACCCGCGTGACCGAACTGGCCGTTCGCCGGTTTGAAGCGCAGGTACTGAAAACACAAAACCTGCAATACGGCATCCAGCAACAGATCATCGAAACGGAAAACCGGATCAATTTCCTCGTCGGACGGTATCCGCAGCCGGTACAGCGCAGCAGCCAGGGATTCGAAAACCTTGTTCCAAACGTGATGCAGTCAGGTATACCGTCGCAGTTGCTTTCCAACCGCCCGGATATCAAGCAGGCGGAGCTCGATTTGCAAGCTGCCAAAATCGATGTGAGCGTGGCCCGCGCCAACTTCTATCCTTCGCTCGGATTGTCGGCCAGCCTCGGTTTGCAGGCGTTCAGCCCGATTTACCTCGCCCGCGTTCCCGAGTCGATCATGGGATCGCTTATCGGCGACCTGGCCGGTCCGGTGATTAACCGCTACGCGATCCGCGCGGGTTATGCCAATGCGAATGCGCGCCAGATCCAGGCTATTTACAACTATGAGCGGACGGTACTGAATGCGTACATCGAAGTCGTGAACCAGCTTTCGAATATCAATAACCTCGAAAAGAGCTTCGACCTGAAAACAAAAGAAGTGGAAGCACTGAACCAGTCGACCACGATTTCCAACCGGTTGTTCGCCTCGGCACGCGCCGATTATATGGAAGTGTTGCTGACCCAGCGCGACGCACTGGAATCGAGATTCGAGCTGATAGAAACCAAAATGCGCCAGATGAATGCCATGGTGAATATCTACCGGGCACTCGGGGGCGGCTGGAATTAA
PROTEIN sequence
Length: 478
MRNKRILNWAGIAFIGLTYSACNIPTMPQKTENRAVPVSYNGSQDSTNTGKLSWKSFFTDPNLNALIDTAFRNNQELNITMQEIAISQNEIGARKGEYLPFIGLRGGAGVEKAARYTNIGASEATTDIKPGRETPDPLPDVNIQAVARWEVDIWHKLRNAKKAAATRYLSSIEGKNFMMTNLAAEIANSYYELLALDTQLAIIRQNIDIQNNALKIVRMEKEATRVTELAVRRFEAQVLKTQNLQYGIQQQIIETENRINFLVGRYPQPVQRSSQGFENLVPNVMQSGIPSQLLSNRPDIKQAELDLQAAKIDVSVARANFYPSLGLSASLGLQAFSPIYLARVPESIMGSLIGDLAGPVINRYAIRAGYANANARQIQAIYNYERTVLNAYIEVVNQLSNINNLEKSFDLKTKEVEALNQSTTISNRLFASARADYMEVLLTQRDALESRFELIETKMRQMNAMVNIYRALGGGWN*