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scnpilot_p_inoc_scaffold_5_21

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(21815..22900)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3C7_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 361.0
  • Bit_score: 669
  • Evalue 1.80e-189
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 361.0
  • Bit_score: 669
  • Evalue 5.00e-190
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACT92231.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 361.0
  • Bit_score: 669
  • Evalue 2.50e-189

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1086
ATGAAAAGAATTCTCATGCTCGTGAGCTTGGGTGCATTGTTGTATCAGACAGGCTGTACATCCAAACACGAAGAAGAAAAAGAAGAACCAGTTCATTATTCCGTAACCAGCCCCTTACAGAAAGACACCACGATCGTCAAAGAATACGTGAGCCAGATCAGGGCGATCAGCCATATCGAGCTGCGTGCTTTGGAAAGAGGTTATTTGCAAAAAATATATGTGGATGAAGGTCAGACTGTGAAAAAAGGCCAGCTGATGTTCCAGATCATGCCGATGGTTTACCAGGCTGAGCAACAAAAAGCACAGGCAGAAGCCAACTTCGCCGAAATCGAATACAAAAACACCAAGGCGCTGGCCGACAGCAATGTAGTTTCCAAAAACGAACTCGCATTGGCGAAAGCGAAACTCGATAAAGCAAAAGCGGAACTGGGGCTCGCTTCGACGCACCTTGGATTTACGGAAATCCGCGCGCCGTTCAATGGTATCATGGACCATTTCCAGGTGCGGTTGGGAAGTCTTGTGGATGAAGGCGACCTGCTCACTACGCTTTCCGACAACAGTGAAATGTGGGTTTATTTCAATGTTCCGGAAGCTGAATACCTCAATTACAAATCGGGAGAAGACAACGGTAACCTCCTGAAAGTGAGACTCAAAATGGCTAACGAAAAGATCTTCGATCATACCGGAGCGGTGAAAACCATCGAGGCCGACTTTAATAACGAAACAGGTAACATCGCATTCCGGGCCACTTTCCCGAACCCGAAAGGCTTGCTCCGCCACGGCGAAACGGGCAACGTGCAAATCAGCGTACCATTGAAAAATGCCCTGTTGATTCCACAGAAAGCAACTTTCGAGGTTTTGGAAAAGAAATACTGCTACGTGATCGACAAAGATGGCAAAGTACAGTCTCGCGAGATCACTATCGCTGCCGAACTGCCGCACATTTTCGCGATCTCACACGGTCTTCAAAAGGACGACAAAATATTGCTGGAAGGCTTGCGCCAGGTACGCGAAAACGAGAAGATCAGCTACAAGTTCCAGAAGCCCGATTCGGTTATTTCTCACCTCAGCCTGTACGCGGAATAA
PROTEIN sequence
Length: 362
MKRILMLVSLGALLYQTGCTSKHEEEKEEPVHYSVTSPLQKDTTIVKEYVSQIRAISHIELRALERGYLQKIYVDEGQTVKKGQLMFQIMPMVYQAEQQKAQAEANFAEIEYKNTKALADSNVVSKNELALAKAKLDKAKAELGLASTHLGFTEIRAPFNGIMDHFQVRLGSLVDEGDLLTTLSDNSEMWVYFNVPEAEYLNYKSGEDNGNLLKVRLKMANEKIFDHTGAVKTIEADFNNETGNIAFRATFPNPKGLLRHGETGNVQISVPLKNALLIPQKATFEVLEKKYCYVIDKDGKVQSREITIAAELPHIFAISHGLQKDDKILLEGLRQVRENEKISYKFQKPDSVISHLSLYAE*