ggKbase home page

scnpilot_p_inoc_scaffold_185_7

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 3863..5104

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003701CB5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 411.0
  • Bit_score: 711
  • Evalue 4.60e-202
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 412.0
  • Bit_score: 584
  • Evalue 1.80e-164
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ81028.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphing similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 412.0
  • Bit_score: 584
  • Evalue 9.20e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1242
ATGGAGGAAAAAGAACTGCTGCCACACCTTTTCAGGACCGAATACCGCAAACTTGTTGCCGTGCTCTGTTACCTTTTCGGGATAGAGCATGTCGAAATCGCGGAGGACATTGCCAGCGACACCTTTCTGGCCGCAGCCGAGACCTGGGGCATGAAAGGGGTGCCGGAAAACCCGGTGGCTTGGCTGTATACCGTCGCCAAGAACCGGACGAAAAACCATTTGAAGCGTAATTCGCTGTTCGAGCAGAAGGTGGCGTCGGAGATCCGCTATTCGGCCGAAAAAGAATCCGAAATTGAGATTGATATGTCGCCCAGGAATATCACAGACAGCCAGCTGGCGATGATTTTCGCGGTATGCAACCCGTTGATCCCGGCCGATTCGCAGGTGGCACTCGCGCTGAACCTGCTGTGCGGTTTTGGCGTCCAGGAAATTGCTGATGCCTTTTTGCTGAATAAGGAAGTCGTGTATAAGCGCATCCAGCGCGCGAAGGAAAAACTGAAAGAGGGTAAGATCGCCATCACACAACCGACGGTGACCGAGATCAGCGAGCGGCTGGAAATGGTCCTGACTACCATCTATTTGCTCTATTCCGAAGGCTATTATTCGATTTCGCAAAATACCACATTACGCAAGGAGCTGTGCGCTGAGGCCATGCGGCTCAATTACCTGCTGATGGAAAATGAGCTGACCGACCGGCCCGAAGTGAGCGCATTGCTTTCGCTGATGTGCTTCCATTCGTCGCGGTTCGAGGCCCGGACGAACCAGCGCGGCGAAATGGTGCTATATGAAGATCAGGACGAATCGCTCTGGGACCGCGAGCTGATCCAGCGCGGGGCATATTACCTGAGCCGTGCTTCCACCGGTGAAAAACTGAGCCGCTACCACCTGGAAGCCGGCATCGCCTATTGGCATACGCATAAGCAGGATTCGAAAGAAAAGTGGACGCATATCCTGGATATCTACAACCATTTGCTGGCCATCGAATATTCGCCGGTTGCCGCATTGAACCGCATTTACGCCCTTGCCAAAGTGAGCGGAAAACAAACCGCGATCGCCGAAGCGCAGCATTTGAGCCTGACCAGCAATCACTTTTACCATTCATTGCTCGGGAATCTTTACACCGGCATCAACGAAGCACAGGCTGTTGCGCATTATGAAGAAGCTATCAGACTTGCGCATTCGGAATCGGACAAGGCAATCCTGTTTAGGAATATCGCACGTTTGCAGGATAATGTGGGTTGA
PROTEIN sequence
Length: 414
MEEKELLPHLFRTEYRKLVAVLCYLFGIEHVEIAEDIASDTFLAAAETWGMKGVPENPVAWLYTVAKNRTKNHLKRNSLFEQKVASEIRYSAEKESEIEIDMSPRNITDSQLAMIFAVCNPLIPADSQVALALNLLCGFGVQEIADAFLLNKEVVYKRIQRAKEKLKEGKIAITQPTVTEISERLEMVLTTIYLLYSEGYYSISQNTTLRKELCAEAMRLNYLLMENELTDRPEVSALLSLMCFHSSRFEARTNQRGEMVLYEDQDESLWDRELIQRGAYYLSRASTGEKLSRYHLEAGIAYWHTHKQDSKEKWTHILDIYNHLLAIEYSPVAALNRIYALAKVSGKQTAIAEAQHLSLTSNHFYHSLLGNLYTGINEAQAVAHYEEAIRLAHSESDKAILFRNIARLQDNVG*