ggKbase home page

scnpilot_p_inoc_scaffold_185_12

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(11846..13027)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI0003639A1F similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 393.0
  • Bit_score: 722
  • Evalue 2.50e-205
  • rbh
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 393.0
  • Bit_score: 713
  • Evalue 4.30e-203
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACT93396.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 393.0
  • Bit_score: 713
  • Evalue 2.10e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1182
ATGAAAACCGTTCAACTCAAAACAGCAAAAAGGCTATCTGCGCTCCTTTTACTGGCAGCGGGAACCGCAGCCATATATAGCTGCGGTTCCTCCACAGCCAACGCTCCGGCAGGCGCTCCGCCTGCACAGGCGTTGCCCGTGATCACCGTCAGCGACCACGAGGTGACTTCGCACCGCGAATTCACCGCTTCCATCCAGGGCAGCCGTGATATCGAGATCCGCCCGCAGGTGGATGGTTACCTCGACCGCATTTCCGTAGATGAAGGTGCGTACGTTCGCAAAGGACAGGTCCTGTTCCATATTGACGCCCGTCCTTATGCGGAACAGCTCAATACCGCCAAGGCCAGCCTGCAATCGGCAAAAGCGGCACTGGAGAGCGCATCGATCAACGTCGAAAAGCTTACTCCGCTGGTAGCCAACAAGGTAGTGTCCGACGTACAGCTGAAAACCGCAAAAGCGGCATATGATGCAGCCAAGGCCAATGTAGCGCAAGCACAGGCAGCCGTGGACGCAGCGAAAATCAATGTCGGCTACACTTCGGTCACAGCTCCGGCGGACGGCTATATCGGTATTATCCCATTTAAGACCGGTAGCCTCGTAGGTAAGAATACCGTCCAGGCATTGACTGTCCTCTCGGAAACCAAAGACATCCACGTGTACTTCTCGATGAGCGAGCTCGATTTCCTCGATTTCAAACAGGAATTTGAAGGCAATACCATTGAGCAGAAGATCAAGAACATCCCGGCGGTTGAGCTCGTACTGGCCGATAACAGCATTTATCCGCAAAAAGGAAAAGTGCAAGTTGTGGAAGGACAGTTCGACAAGACCATGGGGGCGATCAACTTCCGCGCTACATTCCCGAACGGAAACGGGTTGCTGCGCTCGGGTAACACGGGCAGGATCCGCATCCCGCGCCAGCTCGCGAAGTCGGTGCTGATCCCGCAGGAGGCTACTTTCGAATTGCAGGACAAGGTGTTTGTATACACCGTGCTCGATAGCAACAAAGTGGAAGGCCGCCCTGTGACGGTTGCCGATCGCAGCGGACGTTATTACCTGATTTCGAAAGGGTTAAAGCCAGGAGAGAAGATCGTATACGCCGGACTCGACAGGTTGCGCGACGGTATGGCCATTGCTCCGCAGAAAATGTCGATGGACAGTCTGCTGCACGCCAACCCGATTTAA
PROTEIN sequence
Length: 394
MKTVQLKTAKRLSALLLLAAGTAAIYSCGSSTANAPAGAPPAQALPVITVSDHEVTSHREFTASIQGSRDIEIRPQVDGYLDRISVDEGAYVRKGQVLFHIDARPYAEQLNTAKASLQSAKAALESASINVEKLTPLVANKVVSDVQLKTAKAAYDAAKANVAQAQAAVDAAKINVGYTSVTAPADGYIGIIPFKTGSLVGKNTVQALTVLSETKDIHVYFSMSELDFLDFKQEFEGNTIEQKIKNIPAVELVLADNSIYPQKGKVQVVEGQFDKTMGAINFRATFPNGNGLLRSGNTGRIRIPRQLAKSVLIPQEATFELQDKVFVYTVLDSNKVEGRPVTVADRSGRYYLISKGLKPGEKIVYAGLDRLRDGMAIAPQKMSMDSLLHANPI*