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scnpilot_p_inoc_scaffold_173_25

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(21746..22321)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BIX8_ZUNPS similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 192.0
  • Bit_score: 155
  • Evalue 4.50e-35
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 192.0
  • Bit_score: 155
  • Evalue 1.30e-35
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:ADF53611.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 192.0
  • Bit_score: 155
  • Evalue 6.30e-35

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Taxonomy

Zunongwangia profunda → Zunongwangia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
GTGAAGGAACGAAATGAGGTTGATCCTGACCTGCGGACGGTCGAAAGGATCCAGGCGGGCGAGGCGTCCGCATTTCGCGACATTGTTGATAAGTATAAGGATAAGTCACTGTCATTGATTAGCTCGTATATCAAAAATGATCAGCAAGCAGAGGATGTCCTGCAGGACGCATTTATCAAAGCCTTTGATAATATTCATAAATTTCGCCTTGAATCCTTATTCTCTACATGGCTTTATCGAATTATCGTCAACACTTGCCTCAGGCAGAAAGAAACAAATAAAGCAGACCTTTTTGAGGAACTATCTGTCATTGAATCGATAGATTTTCAGAGCGCCTCGGCCATTGAGATGCTGGAACAAAATGAGCGAAGTGCTTACATTGCTCTGACTTTCAAAATGATGAAATCAGAAGAGGCACTGCTTTTAAGGCTTTTTTACCTTTGTGATCTAAGTATTGCGGAAATACAGCAGGTGACCGGTTACAGTGAGTCAAATGTCAAAGTGATATTGCACAGGGCAAGGAAGAATATGTACGGAATTCTGGTAAAATTAACTGGTAATGATCTCAAAATCTGA
PROTEIN sequence
Length: 192
VKERNEVDPDLRTVERIQAGEASAFRDIVDKYKDKSLSLISSYIKNDQQAEDVLQDAFIKAFDNIHKFRLESLFSTWLYRIIVNTCLRQKETNKADLFEELSVIESIDFQSASAIEMLEQNERSAYIALTFKMMKSEEALLLRLFYLCDLSIAEIQQVTGYSESNVKVILHRARKNMYGILVKLTGNDLKI*