ggKbase home page

scnpilot_p_inoc_scaffold_210_88

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(119795..121168)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W7H2_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 457.0
  • Bit_score: 865
  • Evalue 2.80e-248
  • rbh
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 457.0
  • Bit_score: 865
  • Evalue 7.80e-249
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACT94450.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 457.0
  • Bit_score: 865
  • Evalue 3.90e-248

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1374
ATGGCTCATCTGCTCCTCGTTGAAGACGATTCTACATTTTCAAAGTTGCTCACCAATTTTCTCGGCAAGCATGGTCATCAGGTAAAGGTTTGTGCAAATATCAGGGAAGCGAGGGAAGCGCTCGGAAAGAGCAGCTCCGACCGCCCGTTCGAAGTACTGATGCTTGATTACCGTCTGCCGGATGGTAACTCGGTGGATTTTCTCAAAACGCTCAGAAGCGAGGGTAACCGCACGCCTGCATTTATCATGACAAGCTTTCATGATGTGAGGACGGCCGTTACTGCTATGCAAATAGGGGCTTTCGACTATATTACAAAGCCGGTGAACCCGGAGGAATTGCTTATGGTACTCAGAGAAGCGCTGAATAAGGGGGAGGTTACGAGCGTGAAGACTGCGCCGAAGGCCAAAAATAATTCAAAAGCCGAGAAGCAATCGCTCGACTACATCGAAGGTAAGAGTAAGGTCGCGAAGCAGCTCTTCGAATACGTCCGGCTGGTGGCGCCCACGGATATGTCGGTGATTATCCAGGGCGAAAGCGGCACGGGTAAGGAACACGTAGCGAAGTCGATACACCGCCTCAGCAAACGTGCGGACGGACCGTTCGTAGCGATTGACTGCGGTTCACTATCCAAGGACCTGGCGGCCAGTGAGCTGTTTGGCCATAAAAAAGGCGCATTTACCGGTGCATTGCAGGATAAGATAGGGCAGTTTGAGGCAGCCGATGGCGGCACGCTGTTCCTGGATGAGATCGGTAACCTTAGCTACGACGTGCAGATCAAGCTGCTTCGCGCTTTGCAGGAGCGCATTATCGTTCCCATTGGCAGCACGCAGCAGGTGAAAGTCGACGTGCGCCTCATAGCGGCGACCAATGAAGACCTTATTTCCAGTGCCGCTGCCGGCGATTTCCGTGAAGACCTTTACCACCGGCTCAACGAATTCAAAATCGAAGTCCCTGCATTGCGCAAACGCGGTGAAGACCTCCCGATTTTTGTACAGCATTTTGTAGACAAAGCCAATGAGGAACTCGACCGCAACGTGCGGGAGCTTTCCAAAGAAGTAATGGATGTTTTCCAGAAATACGATTGGCCGGGTAACCTCCGTGAGCTGAACAATGTGATCAAGCGCCTTGTACTTCTTTCCAAGGAAGAAATAGCCACGCTGAGTGCATTGCCCTCGGAGATGATTACCGCGATGGAAGATCAGCAGAAGCCCGCACCAGGCTCCGATTTGAAGGCATTGCAGGAAACGCACGAAAAGGAGATGATTGAAAAAGTATTGCAGGAAGTACGCTACAATAAAAGCAAGGCGGCGAAGCTACTCAATATCGACCGCAAGACTTTGTATTATAAAATCGAAAAATATCATATCGAGTAG
PROTEIN sequence
Length: 458
MAHLLLVEDDSTFSKLLTNFLGKHGHQVKVCANIREAREALGKSSSDRPFEVLMLDYRLPDGNSVDFLKTLRSEGNRTPAFIMTSFHDVRTAVTAMQIGAFDYITKPVNPEELLMVLREALNKGEVTSVKTAPKAKNNSKAEKQSLDYIEGKSKVAKQLFEYVRLVAPTDMSVIIQGESGTGKEHVAKSIHRLSKRADGPFVAIDCGSLSKDLAASELFGHKKGAFTGALQDKIGQFEAADGGTLFLDEIGNLSYDVQIKLLRALQERIIVPIGSTQQVKVDVRLIAATNEDLISSAAAGDFREDLYHRLNEFKIEVPALRKRGEDLPIFVQHFVDKANEELDRNVRELSKEVMDVFQKYDWPGNLRELNNVIKRLVLLSKEEIATLSALPSEMITAMEDQQKPAPGSDLKALQETHEKEMIEKVLQEVRYNKSKAAKLLNIDRKTLYYKIEKYHIE*