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scnpilot_p_inoc_scaffold_415_40

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 41283..42659

Top 3 Functional Annotations

Value Algorithm Source
O-antigen flippase Wzx n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FMM8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 444.0
  • Bit_score: 289
  • Evalue 8.20e-75
O-antigen flippase Wzx {ECO:0000313|EMBL:EIA10240.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frig similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 444.0
  • Bit_score: 289
  • Evalue 1.20e-74
LPS biosynthesis related polysaccharide transporter/flippase similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 432.0
  • Bit_score: 284
  • Evalue 4.40e-74

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Taxonomy

Flavobacterium frigoris → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1377
ATGTTAACGATATCCAAGCGCTCCACTTCCGAAAGAAACCCTGAAACTGGGCAAGGGAAGAAATCTGTGCCTAAAAGCATCCTTACCCTTGCATTTTTTAGAGGAGGAAATGTGGGTATCCAACTGCTATTAGTGCCAATTTCAATAAACTATGTTTCCGCCGAGTATTACGGGCTTTGGTTGACAATTAGCTCTATGATCACTTGGCTCAATATAATGGATTTTGGGCTATCAAATGGACTGCGAAACAAACTGGCCATATCCAAATTGCAAAGAGATGTAGGTCTCAGCAAAAGATATATCAGCACGACCTATGCCATACTTTTTTACATTGCAATTATAGGGATCATTGCTGGCTCAATCGTTTCCTATTTTGTTAACTGGAGTAGTGTCCTGGACATCCCGTCAAATTTTCCGAAGGATTCATTTTTCGCTTTACTGATTATAGTAATTATCTCGTTCTTTCTTACTTTTCTATTAAAGCCTATCAGCGCGGTCGCCTATTCATTTCATTATCCCTTTGTTGAACCGATGCTTTCATGCATTTCTTCTGCGGTCAACCTGGTGCTATTGCTAGCCCTTAGAGATCTAGACAAAACGGGGAATGTCATCCATTTGGCATTAGTATTCTGTCTAAGCCCAATTGGTGTTAACGCCTTAATAAGTTTCGTTTTATTCAGAACTAGATTTAGGGAATATGCACCGTCTATTCGGGATATTGATATGAGCGAAGCAAAACCACTAATGTCTTTAAGTGTTCAATTTTTTGTCATTCAGATTGCCGCGACGCTAGTGCTCACCACAACAAATTTCATTATTTCGCACTATTTCGGGAATACTGCGGTCACCGAATACAATGTTGTTCAAAGGTATTTTAGTGTAGTTCTCATTTTACAAGGGATGATTCTGGCTCCGTTCTGGAATCTTATTACGGAAGCTTACACCTCCCAACAACCTGAATGGCTCAAAAAAACAATGAAAAAATTACTTCTGATCACACTTGGCTTCTCAATAGTTGTTGCGATAATGATTATCACCTCTCCTTTTATCTTGAAGTTTTGGATAGGAGACAGTGTGGCCGTTACAATGCCGCTAACGATTGCATTCGGCTTTTACACGATTGTGTTCATTTATGCAACTTTATTCACAACATTTATCAATGGAACCGGAAAAGTAAAATTACAAATGACCACGTCAGTGTTTACTTGCATTTTCTATATACCTTTTGTCATTCTGCTCGTAAAGGTGTTCAATATTGGAATCATTGGAATCGTCATTGCAAGTACAATATGGACCATTCTAATATTGCCGTTAAGGTATATTCAATATAGAAAACTGGTATCATTTCCGGTTAAAAAAAGCATTTGGACCTCTTAG
PROTEIN sequence
Length: 459
MLTISKRSTSERNPETGQGKKSVPKSILTLAFFRGGNVGIQLLLVPISINYVSAEYYGLWLTISSMITWLNIMDFGLSNGLRNKLAISKLQRDVGLSKRYISTTYAILFYIAIIGIIAGSIVSYFVNWSSVLDIPSNFPKDSFFALLIIVIISFFLTFLLKPISAVAYSFHYPFVEPMLSCISSAVNLVLLLALRDLDKTGNVIHLALVFCLSPIGVNALISFVLFRTRFREYAPSIRDIDMSEAKPLMSLSVQFFVIQIAATLVLTTTNFIISHYFGNTAVTEYNVVQRYFSVVLILQGMILAPFWNLITEAYTSQQPEWLKKTMKKLLLITLGFSIVVAIMIITSPFILKFWIGDSVAVTMPLTIAFGFYTIVFIYATLFTTFINGTGKVKLQMTTSVFTCIFYIPFVILLVKVFNIGIIGIVIASTIWTILILPLRYIQYRKLVSFPVKKSIWTS*