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scnpilot_p_inoc_scaffold_4175_8

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(7321..8541)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W352_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 387.0
  • Bit_score: 643
  • Evalue 2.00e-181
Fis family sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 387.0
  • Bit_score: 643
  • Evalue 5.60e-182
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ACT92156.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dya similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 387.0
  • Bit_score: 643
  • Evalue 2.80e-181

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1221
ATGACCCCAACTACGAAGGTAAATTCTCAGATCTTCTCCCAAACCGCTGGAAAGCGAACCAGTAATCCTCGTCTATACCTCGAAGAAACCAAGGGGGACAGCCGACTGCTTACGCTTGGTGAGCAGATCAGCGGGCCGCTTTTGCAGGGTATTTGTGCGCAGATTTCGACTGCGCTTTCGAATGTGCTCGCCCATGAGCAGATCCTGCGTTTGAAAAAGCAGCTGGAAGACGAAAATGATTATCTTAAACAGCAACTCAATACTAATTTTGAGGGGATCGTGGGCATCGGTGAGGCTATGCAGCAGGTTTACCGGCTCATTTCATTAGTGGCTGAAAATAACACGACGGTGCTGCTGCTCGGTGAAACGGGAACCGGAAAGGAGATGATCGCCCGGGCCGTACACCAAGCATCTGCCCGCAATGGAAAGCTGATGATCAAGGTCAATTGCGCGGCCATGCCGGCCAGCCTGATCGAAAGTGAATTGTTTGGACACGAACGCGGCGCATTCACCGGGGCCGTCGAGCGGCGCATCGGCAAGTTCGAGCTGGCCAACGACAGTACGCTGTTTCTGGACGAGGTAGGGGAGATGCCGCTGGAAACACAAGTAAAGCTGCTGCGGGTTTTGCAGGAAAAGGAAATGGAGCGCTTGGGCGGGAAAAACACGATCAAACTAAACGTCCGGATCATCGCGGCGACCAACCGCGACCTGGAAGCGGAGGTGAAAGCGGGCCGGTTCCGTTCGGATTTGTATTACCGTTTGAATGTATTCCCCATCAAGCTGCCGCCACTTCGCGACCGCCGTGAAGATATTGAAAGTCTTGCCGGATTTTTCCTGGCTAAATTCAGCAAAAGCATAGGCAAGAAAACCGTGAAGCTCTCAGCGAATGCATTAAGGCAATTGCAAGCCTATTTGTGGCCCGGTAATGTGCGCGAACTTGAACACCTCATTGAACGCTCGGTGATACTCGCAACCGAACCCATAATCCGCGAATTCTTTCTGCCGAAGGCGGCAGGCGCAGCAGCGGACGCTCAGCCGATGCAATCCGATTTAACATTGGAAGAAGTCGAGCGCATGCATATCATACAGGTGTTGCGCCGGTGCGGGGGCAAGATTTCTGGCATTGGCGGGGCCGCTGAAATCTTGGGCATTCCCGGAAATACCCTGCATTCCAAGATACGCAAACTCGGTATTGCAAAGGCTGATTACTTCTCGCATTAA
PROTEIN sequence
Length: 407
MTPTTKVNSQIFSQTAGKRTSNPRLYLEETKGDSRLLTLGEQISGPLLQGICAQISTALSNVLAHEQILRLKKQLEDENDYLKQQLNTNFEGIVGIGEAMQQVYRLISLVAENNTTVLLLGETGTGKEMIARAVHQASARNGKLMIKVNCAAMPASLIESELFGHERGAFTGAVERRIGKFELANDSTLFLDEVGEMPLETQVKLLRVLQEKEMERLGGKNTIKLNVRIIAATNRDLEAEVKAGRFRSDLYYRLNVFPIKLPPLRDRREDIESLAGFFLAKFSKSIGKKTVKLSANALRQLQAYLWPGNVRELEHLIERSVILATEPIIREFFLPKAAGAAADAQPMQSDLTLEEVERMHIIQVLRRCGGKISGIGGAAEILGIPGNTLHSKIRKLGIAKADYFSH*