ggKbase home page

scnpilot_p_inoc_scaffold_7619_2

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(965..1414)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D66BD similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 149.0
  • Bit_score: 170
  • Evalue 1.10e-39
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 149.0
  • Bit_score: 167
  • Evalue 3.30e-39
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT95916.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 149.0
  • Bit_score: 167
  • Evalue 1.60e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 450
ATGCATGATCCTTGGAACAATTATAAGACTCAACCGTCGTCGACACCATTAACAAAAAAAAGTTCTGAAAAGACAGCCACGGATGAATTCCTTTCGACTAGTTTCATAAGGGCAACTTTCGACAAAAATCCTTCGGAAGGATTAAAAGTACTTTTCCTGCGATATTATAAGCCTTTGTGTAGTCACGCAATGCGGTTTGTTCATTGTAAGCAGGTCTCGGAGGACTTAGTCAGTGAAGTGTTTTTTCAGTTTTACCGGACCAAAGCTTACCTCAATATTTCGAGCTCCTATGTCAGCTATCTTTTTCGTGCAGTTCGTAATGAATGCTATTCTTATTTAAAAAAAAGACTAAGGGAAGTCGATTCGGTCGAGGCCTCAACGGAATTTGCCCAGTTAGTTCACGGGGTACAACCCGACGAGGAGTTGCATTATAAAAATCTGTTTTTTTAA
PROTEIN sequence
Length: 150
MHDPWNNYKTQPSSTPLTKKSSEKTATDEFLSTSFIRATFDKNPSEGLKVLFLRYYKPLCSHAMRFVHCKQVSEDLVSEVFFQFYRTKAYLNISSSYVSYLFRAVRNECYSYLKKRLREVDSVEASTEFAQLVHGVQPDEELHYKNLFF*