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scnpilot_p_inoc_scaffold_24

Search features with annotation key words

Displaying items 331-360 of 496 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_24_331
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348213..351275)
DNA (3063bp) protein (1021aa)
histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031EF477 rbh
Histidine kinase {ECO:0000313|EMBL:AHY59653.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
two-component system sensor kinase/response regulator fusion protein with GGDEF signalling domain
scnpilot_p_inoc_scaffold_24_332
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(351380..352783)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030AA6CB rbh
two-component system, sensor histidine kinase transcriptional regulator
scnpilot_p_inoc_scaffold_24_333
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(352780..353481)
DNA (702bp) protein (234aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E57A31 rbh
Stenotrophomonas maltophilia strain ZBG7B contig_59, whole genome shotgun sequence {ECO:0000313|EMBL:KIP83701.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
winged helix family two component transcriptional regulator
scnpilot_p_inoc_scaffold_24_334
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(353561..355078)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI000369EA8E rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC87077.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
beta-N-acetylhexosaminidase
scnpilot_p_inoc_scaffold_24_335
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(355175..356515)
DNA (1341bp) protein (447aa)
Prolidase {ECO:0000313|EMBL:EGP08491.1}; EC=3.4.13.9 {ECO:0000313|EMBL:EGP08491.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Brad
Prolidase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKX2_9BRAD
Imidazolonepropionase and related amidohydrolase
scnpilot_p_inoc_scaffold_24_336
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356621..357667)
DNA (1047bp) protein (349aa)
Probable murein peptide carboxypeptidase n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DTF7_9GAMM rbh
Microcin C7 resistance protein MccF {ECO:0000313|EMBL:AKC87942.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="
peptidase U61 LD-carboxypeptidase A
scnpilot_p_inoc_scaffold_24_337
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(357971..359593)
DNA (1623bp) protein (541aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002376974
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_24_338
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359776..363321)
DNA (3546bp) protein (1182aa)
NODE_51, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96002.1}; EC=5.4.99.2 {ECO:0000313|EMBL:KIQ96002.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
methylmalonyl-CoA mutase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EF2F8B rbh
methylmalonyl-CoA mutase
scnpilot_p_inoc_scaffold_24_339
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

363605..364702
DNA (1098bp) protein (366aa)
glu/leu/phe/val dehydrogenase (EC:1.4.1.-)
Probable glu/leu/phe/val dehydrogenase protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U9Q0_XANAP rbh
Leucine dehydrogenase {ECO:0000313|EMBL:AHY58180.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomona
scnpilot_p_inoc_scaffold_24_340
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(364776..367607)
DNA (2832bp) protein (944aa)
peptidase S8 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000362A4E8 rbh
Serine protease {ECO:0000313|EMBL:AHY58179.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhiz
autotransporter-associated beta strand repeat-containing protein
scnpilot_p_inoc_scaffold_24_341
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

367792..368967
DNA (1176bp) protein (392aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADV27479.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ADV27479.1};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
acetyl-CoA acetyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003067C7B rbh
scnpilot_p_inoc_scaffold_24_342
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

369090..369431
DNA (342bp) protein (114aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7VV99_STEMA
outer membrane lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EJP80288.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
scnpilot_p_inoc_scaffold_24_343
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

369675..370070
DNA (396bp) protein (132aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003056ACD
Stenotrophomonas maltophilia strain ZBG7B contig_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86632.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
outer membrane lipoprotein
scnpilot_p_inoc_scaffold_24_344
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370186..371829)
DNA (1644bp) protein (548aa)
acyl-CoA dehydrogenase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037D2F28 rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJC45454.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari
scnpilot_p_inoc_scaffold_24_345
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(371918..373147)
DNA (1230bp) protein (410aa)
Oxidoreductase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GAZ2_XANCT rbh
Oxidoreductase {ECO:0000313|EMBL:ELQ02447.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DA
oxidoreductase rbh
scnpilot_p_inoc_scaffold_24_346
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(373220..373426)
DNA (207bp) protein (69aa)
Cold shock protein n=22 Tax=Xanthomonas RepID=Q5H1P7_XANOR
scoF; cold shock protein
Cold-shock protein {ECO:0000313|EMBL:KGE52849.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis
scnpilot_p_inoc_scaffold_24_347
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(373517..374263)
DNA (747bp) protein (249aa)
Probable S-methyl-5'-thioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.44 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963};
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SRK1_STRM5 rbh
5'-methylthioadenosine phosphorylase
scnpilot_p_inoc_scaffold_24_348
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(374495..375046)
DNA (552bp) protein (184aa)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Stenotrophomonas maltophilia RepID=J7VPS4_STEMA rbh
phosphoribosyltransferase
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EJP80299.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotr
scnpilot_p_inoc_scaffold_24_349
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(375046..376053)
DNA (1008bp) protein (336aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:00
Beta-hexosaminidase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYX8_STEMA rbh
beta-hexosaminidase
scnpilot_p_inoc_scaffold_24_350
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(376108..376803)
DNA (696bp) protein (232aa)
polyketide synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F8AE53 rbh
Polyketide synthase {ECO:0000313|EMBL:AHY58164.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
DSBA oxidoreductase
scnpilot_p_inoc_scaffold_24_351
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(376830..377333)
DNA (504bp) protein (168aa)
adenylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000375071A
CYTH domain protein {ECO:0000313|EMBL:AHY58163.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
adenylate cyclase
scnpilot_p_inoc_scaffold_24_352
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(377546..378931)
DNA (1386bp) protein (462aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0
23S rRNA methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000365455B rbh
23S rRNA (uracil-5-)-methyltransferase RumA
scnpilot_p_inoc_scaffold_24_353
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

379008..379724
DNA (717bp) protein (239aa)
Chemotaxis response regulator protein-glutamate methylesterase n=2 Tax=Stenotrophomonas RepID=M5D2A0_STEMA
Response regulator {ECO:0000313|EMBL:EED38067.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas s
response regulator
scnpilot_p_inoc_scaffold_24_354
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(379749..380471)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000308CDD7 rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=216778 species="Bacteria; Proteobacteria; Gam
recO; DNA repair protein RecO
scnpilot_p_inoc_scaffold_24_355
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(380526..381425)
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KMK4_STEMA rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas;
era; GTP-binding protein Era
scnpilot_p_inoc_scaffold_24_356
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(381422..382084)
DNA (663bp) protein (221aa)
ribonuclease 3 (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYY5_STEMA rbh
scnpilot_p_inoc_scaffold_24_357
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(382089..382457)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A21B88
Membrane protein {ECO:0000313|EMBL:KGE52836.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv
hypothetical protein
scnpilot_p_inoc_scaffold_24_358
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(382485..383303)
DNA (819bp) protein (273aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
lepB; Signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z7C8_XANCT rbh
scnpilot_p_inoc_scaffold_24_359
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(383347..385140)
DNA (1794bp) protein (598aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYY8_STEMA rbh
GTP-binding protein lepA
scnpilot_p_inoc_scaffold_24_360
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(385295..386812)
DNA (1518bp) protein (506aa)
peptidase S1 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F1429D rbh
Peptidase S1 {ECO:0000313|EMBL:AHY58153.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizoph
subfamily S1C unassigned peptidase
Displaying items 331-360 of 496 in total

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