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scnpilot_p_inoc_scaffold_24

Search features with annotation key words

Displaying items 421-450 of 496 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_24_421
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(458322..459914)
DNA (1593bp) protein (531aa)
Virulence factor n=2 Tax=Xanthomonas RepID=G2LWE4_9XANT rbh
mviN; virulence factor rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomo
scnpilot_p_inoc_scaffold_24_422
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


460030..460299
DNA (270bp) protein (90aa)
30S ribosomal protein S20 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E34145
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr
rpsT; 30S ribosomal protein S20
scnpilot_p_inoc_scaffold_24_423
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(460689..461744)
DNA (1056bp) protein (352aa)
GTPase CgtA n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031C5FE8 rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomon
obgE; GTPase ObgE
scnpilot_p_inoc_scaffold_24_424
unknown

Not on your lists

comp(461731..462534)
DNA (804bp) protein (268aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_24_425
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(462656..462916)
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000027695E
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr
LSU ribosomal protein L27P
scnpilot_p_inoc_scaffold_24_426
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(462934..463242)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Xanthomonas arboricola RepID=UPI00030F95CA
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xan
scnpilot_p_inoc_scaffold_24_427
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

463525..466485
DNA (2961bp) protein (987aa)
UvrABC system protein A n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KL15_STEMA rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ABC subunit A rbh
scnpilot_p_inoc_scaffold_24_428
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

466485..466892
DNA (408bp) protein (136aa)
thioesterase n=1 Tax=Xanthomonadaceae RepID=UPI000299F100
thioesterase
Thioesterase {ECO:0000313|EMBL:EQM81988.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia grou
scnpilot_p_inoc_scaffold_24_429
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(466980..468572)
DNA (1593bp) protein (531aa)
Peptidase M28 n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L399_9GAMM rbh
Peptidase M28 {ECO:0000313|EMBL:EED40648.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SK
peptidase M28
scnpilot_p_inoc_scaffold_24_430
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(468697..469578)
DNA (882bp) protein (294aa)
Nitrilase n=7 Tax=Xanthomonas RepID=Q8PIP6_XANAC rbh
putative amidohydrolase
Nitrilase {ECO:0000313|EMBL:AAM37694.1}; TaxID=190486 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citri
scnpilot_p_inoc_scaffold_24_431
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(469575..470180)
DNA (606bp) protein (202aa)
Acetyltransferase, GNAT family n=4 Tax=Xanthomonas RepID=H1XI24_9XANT
Uncharacterized protein {ECO:0000313|EMBL:CEH55660.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
hypothetical protein
scnpilot_p_inoc_scaffold_24_432

Not on your lists

comp(470306..470539)
DNA (234bp) protein (78aa)
Putative integron gene cassette protein (Fragment) n=1 Tax=uncultured bacterium RepID=B0BJS6_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP49034.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_p_inoc_scaffold_24_433
unknown

Not on your lists

comp(470558..470944)
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_24_434
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(470941..472269)
DNA (1329bp) protein (443aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FD0239 rbh
membrane protein rbh
Membrane protein {ECO:0000313|EMBL:AJC47867.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
scnpilot_p_inoc_scaffold_24_435
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

472487..475501
DNA (3015bp) protein (1005aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT39_9BURK rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EGI77035.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemon
diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_24_436
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(475523..476965)
DNA (1443bp) protein (481aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; X
histidine kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FE44B9 rbh
histidine kinase
scnpilot_p_inoc_scaffold_24_437
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(477539..478231)
DNA (693bp) protein (231aa)
Two-component system regulatory protein n=3 Tax=Xanthomonas RepID=Q3BR67_XANC5 rbh
creB; DNA-binding response regulator CreB
DNA-binding response regulator CreB {ECO:0000313|EMBL:AEO43055.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xantho
scnpilot_p_inoc_scaffold_24_438
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

478277..479134
DNA (858bp) protein (286aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rul
protein involved in catabolism of external DNA n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037F2FAA rbh
hypothetical protein
scnpilot_p_inoc_scaffold_24_439
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

479307..479852
DNA (546bp) protein (182aa)
acyl-CoA synthetase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000309E761 rbh
Acyl-CoA synthetase {ECO:0000313|EMBL:AHY59755.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
N-acetyltransferase GCN5
scnpilot_p_inoc_scaffold_24_440
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

480040..483510
DNA (3471bp) protein (1157aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=868597 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K339_STEMA rbh
transcription-repair coupling factor
scnpilot_p_inoc_scaffold_24_441
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

483603..484229
DNA (627bp) protein (209aa)
Metal dependent phosphohydrolase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUM1_PSEUU
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADV27723.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
scnpilot_p_inoc_scaffold_24_442
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(484248..485747)
DNA (1500bp) protein (500aa)
Cardiolipin synthetase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WBF0_9MICO rbh
Cardiolipin synthetase {ECO:0000313|EMBL:GAB96565.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_p_inoc_scaffold_24_443
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

485956..486399
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL36408.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
scnpilot_p_inoc_scaffold_24_444
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

486396..486725
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B751
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF45511.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (
scnpilot_p_inoc_scaffold_24_445
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(486902..489001)
DNA (2100bp) protein (700aa)
Putative endopeptidase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CKN5_STEMA rbh
Endothelin-converting enzyme 1 {ECO:0000313|EMBL:EMI50888.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomona
peptidase
scnpilot_p_inoc_scaffold_24_446
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(489129..489608)
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=RifCSPlowO2_12_Burkholderiales_67_14_
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Dyella ginsengisoli RepID=UPI00034AAE3C rbh
3-demethylubiquinone-9 3-methyltransferase
scnpilot_p_inoc_scaffold_24_447
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(489798..490169)
DNA (372bp) protein (124aa)
Cyclic diguanosine monophosphate-binding protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPN3_AZOSU
type IV pilus assembly PilZ
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIR
scnpilot_p_inoc_scaffold_24_448
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

490428..490817
DNA (390bp) protein (130aa)
XRE family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLE0_9GAMM
XRE family transcriptional regulator {ECO:0000313|EMBL:EIL88031.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
hypothetical protein
scnpilot_p_inoc_scaffold_24_449
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(490893..491642)
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.4)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=2 Tax=Stenotrophomonas maltophilia RepID=G0K335_STEMA rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
scnpilot_p_inoc_scaffold_24_450
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491743..492423
DNA (681bp) protein (227aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CDT2_9XANT
Endonuclease V
Displaying items 421-450 of 496 in total

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