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scnpilot_p_inoc_scaffold_24

Search features with annotation key words

Displaying items 121-150 of 496 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_24_121
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128471..128947
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VP86_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP80119.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
scnpilot_p_inoc_scaffold_24_122
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128985..130775
DNA (1791bp) protein (597aa)
acyl-CoA dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037CC511 rbh
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EZP42341.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
scnpilot_p_inoc_scaffold_24_123
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130853..131518
DNA (666bp) protein (222aa)
HNH endonuclease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EB797C rbh
Stenotrophomonas maltophilia strain ZBG7B contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87747.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xa
HNH endonuclease
scnpilot_p_inoc_scaffold_24_124
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131846..133756
DNA (1911bp) protein (637aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; EC=2.2.1.7 {ECO:0000255|HAMAP-Rule:MF_00315};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; Short=
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FIE5_STEMA rbh
scnpilot_p_inoc_scaffold_24_125

Not on your lists

134095..135135
DNA (1041bp) protein (347aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
beta-lactamase (EC:3.5.2.6)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D8305
scnpilot_p_inoc_scaffold_24_126
Shewanella oneidensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135684..141830
DNA (6147bp) protein (2049aa)
Ig family protein n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KRJ3_SHESA rbh
bifunctional autotransporter / adhesin cadherin family
Bifunctional autotransporter / adhesin cadherin family {ECO:0000313|EMBL:AAN53276.1}; TaxID=211586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;
scnpilot_p_inoc_scaffold_24_127
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142596..143210)
DNA (615bp) protein (205aa)
pgsA; phosphotidylglycerophosphate synthetase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=3 Tax=Stenotrophomonas maltophilia RepID=M3FAP5_STEMA rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EQM80209.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea
scnpilot_p_inoc_scaffold_24_128
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143218..145137)
DNA (1920bp) protein (640aa)
UvrABC system protein C n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2X2_XANCT rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
scnpilot_p_inoc_scaffold_24_129
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145134..146549)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000300BDDF rbh
RING finger protein nhl-1 {ECO:0000313|EMBL:CCP38486.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas tra
nhl repeat protein
scnpilot_p_inoc_scaffold_24_130
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146546..147034)
DNA (489bp) protein (163aa)
phosphotyrosine protein phosphatase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E205F1
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AKC85504.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="
protein tyrosine phosphatase
scnpilot_p_inoc_scaffold_24_131
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147031..147804)
DNA (774bp) protein (258aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-k
3-deoxy-manno-octulosonate cytidylyltransferase n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0SUK3_XANCT rbh
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
scnpilot_p_inoc_scaffold_24_132
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148024..149046)
DNA (1023bp) protein (341aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5H6_STEMA rbh
scnpilot_p_inoc_scaffold_24_133
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149046..150791)
DNA (1746bp) protein (582aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; X
ATP-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B153 rbh
lipid transporter ATP-binding/permease
scnpilot_p_inoc_scaffold_24_134
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150788..151210)
DNA (423bp) protein (141aa)
Macromelcule import protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZI55_XANCT
Biopolymer transporter {ECO:0000313|EMBL:AHY59552.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomon
biopolymer transport protein ExbD/TolR
scnpilot_p_inoc_scaffold_24_135
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151217..151876)
DNA (660bp) protein (220aa)
biopolymer transporter ExbB n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037078A3 rbh
Biopolymer transport protein {ECO:0000313|EMBL:EMI50650.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas
biopolymer transport protein
scnpilot_p_inoc_scaffold_24_136
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151880..154300)
DNA (2421bp) protein (807aa)
Putative competence-related dna-transformation transporter protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UGZ7_XANAP rbh
Transporter {ECO:0000313|EMBL:AKC88096.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwone
competence-related DNA-transformation transporter
scnpilot_p_inoc_scaffold_24_137
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154526..156634)
DNA (2109bp) protein (703aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) rbh
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=743721
Polyribonucleotide nucleotidyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WU18_PSEUU rbh
scnpilot_p_inoc_scaffold_24_138
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(156782..157042)
DNA (261bp) protein (87aa)
30S ribosomal protein S15 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031D007B
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lys
30S ribosomal protein S15
scnpilot_p_inoc_scaffold_24_139
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157225..158136)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQR8_STRM5 rbh
truB; tRNA pseudouridine synthase B
scnpilot_p_inoc_scaffold_24_140
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158572..158964)
DNA (393bp) protein (131aa)
ribosome-binding factor A n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003714F35
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Ste
rbfA; ribosome-binding factor A
scnpilot_p_inoc_scaffold_24_141
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(159040..161673)
DNA (2634bp) protein (878aa)
translation initiation factor IF-2 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FF5C8B rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
infB; translation initiation factor 2
scnpilot_p_inoc_scaffold_24_142
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161769..163280)
DNA (1512bp) protein (504aa)
peptidase M54 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F818D7 rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenot
nusA; transcription termination protein NusA
scnpilot_p_inoc_scaffold_24_143
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163285..163875)
DNA (591bp) protein (197aa)
ribosome maturation protein RimP n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D55310 rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
rimP; ribosome maturation factor RimP
scnpilot_p_inoc_scaffold_24_144
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164356..165816)
DNA (1461bp) protein (487aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
nuoN; NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E6000A rbh
scnpilot_p_inoc_scaffold_24_145
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165854..167365)
DNA (1512bp) protein (504aa)
NADH:ubiquinone oxidoreductase subunit M {ECO:0000313|EMBL:KDE91228.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KDE91228.1};; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadale
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030E683D rbh
scnpilot_p_inoc_scaffold_24_146
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167386..169527)
DNA (2142bp) protein (714aa)
NADH dehydrogenase I subunit L {ECO:0000313|EMBL:EZP47180.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EZP47180.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomo
NADH dehydrogenase subunit L (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030844ED rbh
scnpilot_p_inoc_scaffold_24_147
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169535..169840)
DNA (306bp) protein (102aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-quinone oxidoreductase subunit K n=3 Tax=Xanthomonas campestris pv. translucens RepID=K8ZG70_XANCT
NADH-quinone oxidoreductase subunit K
scnpilot_p_inoc_scaffold_24_148
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169837..170496)
DNA (660bp) protein (220aa)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F0E885 rbh
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:AHY58312.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" sour
NADH:ubiquinone oxidoreductase subunit J
scnpilot_p_inoc_scaffold_24_149
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170507..170995)
DNA (489bp) protein (163aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH dehydrogenase subunit I n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003073FE9 rbh
scnpilot_p_inoc_scaffold_24_150
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170999..172093)
DNA (1095bp) protein (365aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031D77E2 rbh
Displaying items 121-150 of 496 in total

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