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scnpilot_p_inoc_scaffold_24

Search features with annotation key words

Displaying items 241-270 of 496 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_24_241
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260443..261831)
DNA (1389bp) protein (463aa)
Decarboxylase family protein n=2 Tax=Stenotrophomonas maltophilia RepID=I0KLR7_STEMA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM50699.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltop
scnpilot_p_inoc_scaffold_24_242
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(261946..265197)
DNA (3252bp) protein (1084aa)
Oar protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KLV5_STEMA rbh
Oar protein {ECO:0000313|EMBL:EQM80187.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group
TonB-dependent outer membrane receptor rbh
scnpilot_p_inoc_scaffold_24_243
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265414..266007)
DNA (594bp) protein (198aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D298EE rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxan
multiple antibiotic resistance (MarC)-like protein
scnpilot_p_inoc_scaffold_24_244
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266004..266762)
DNA (759bp) protein (253aa)
short-chain dehydrogenase n=1 Tax=Xanthomonas arboricola RepID=UPI0002D879EC rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EYR70326.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsi
short-chain dehydrogenase
scnpilot_p_inoc_scaffold_24_245
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266759..267079)
DNA (321bp) protein (107aa)
Monothiol glutaredoxin n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZAF7_9XANT
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. c
hypothetical protein
scnpilot_p_inoc_scaffold_24_246
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267202..267780
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
sodB; superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030FF5C4 rbh
scnpilot_p_inoc_scaffold_24_247
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267873..268208)
DNA (336bp) protein (112aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Alkylhydroperoxidase like protein, AhpD family n=2 Tax=Stenotrophomonas RepID=G0K4T4_STEMA
alkylhydroperoxidase
scnpilot_p_inoc_scaffold_24_248
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268313..269458)
DNA (1146bp) protein (382aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FB0A4C rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
scnpilot_p_inoc_scaffold_24_249
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269455..269958)
DNA (504bp) protein (168aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E56FE6 rbh
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
scnpilot_p_inoc_scaffold_24_250
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270018..270287
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI000262ADC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKU25013.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas trans
scnpilot_p_inoc_scaffold_24_251
Xanthomonas perforans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270287..271159
DNA (873bp) protein (291aa)
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) {ECO:0000313|EMBL:EGD16248.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EGD16248.1};; TaxID=925776 species="Bacteria; Proteobacteria; Gammaproteobacteria;
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BLH4_9XANT rbh
nadC; nicotinate-nucleotide pyrophosphorylase
scnpilot_p_inoc_scaffold_24_252
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271198..272151
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003040D06 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY59572.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
scnpilot_p_inoc_scaffold_24_253
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272261..272611
DNA (351bp) protein (117aa)
membrane protein n=1 Tax=Xanthomonas oryzae RepID=UPI00037F08E2
Membrane protein {ECO:0000313|EMBL:AHY59573.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
hypothetical protein
scnpilot_p_inoc_scaffold_24_254
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272680..273156)
DNA (477bp) protein (159aa)
peptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B1CF9
Stringent starvation protein B {ECO:0000313|EMBL:EGD10673.1}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
sspB; putative ClpXP protease specificity-enhancing factor
scnpilot_p_inoc_scaffold_24_255
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273203..273838)
DNA (636bp) protein (212aa)
Stringent starvation protein A n=11 Tax=Xanthomonas RepID=G2LVX5_9XANT rbh
Stringent starvation protein A {ECO:0000313|EMBL:KHL58612.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
gst; Glutathione-S-transferase
scnpilot_p_inoc_scaffold_24_256
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273990..274733)
DNA (744bp) protein (248aa)
Cytochrome c1 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR12_PSEUU rbh
cytochrome C1 rbh
Cytochrome c1 {ECO:0000313|EMBL:ADV26684.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pse
scnpilot_p_inoc_scaffold_24_257
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274726..275988)
DNA (1263bp) protein (421aa)
Cytochrome b n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR11_PSEUU rbh
cytochrome b/b6 domain
Cytochrome b {ECO:0000256|RuleBase:RU003385}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Ps
scnpilot_p_inoc_scaffold_24_258
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275991..276611)
DNA (621bp) protein (207aa)
ubiquinol-cytochrome C reductase, iron-sulfur subunit (EC:1.10.2.2)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria;
ubiquinol-cytochrome C reductase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036A73A9 rbh
scnpilot_p_inoc_scaffold_24_259
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276784..277692)
DNA (909bp) protein (303aa)
Soluble lytic murein transglycosylase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L2U6_9GAMM rbh
Transglycosylase {ECO:0000313|EMBL:AHY59579.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
lytic transglycosylase
scnpilot_p_inoc_scaffold_24_260
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

277838..279295
DNA (1458bp) protein (486aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Xanthomonas axonopodis pv. citrumelo F1 RepID=G2LVY2_9XANT rbh
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
scnpilot_p_inoc_scaffold_24_261
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

279874..280320
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Acinetobacter calcoaceticus RepID=UPI0002FCD21A
Uncharacterized protein {ECO:0000313|EMBL:AFT89682.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phen
scnpilot_p_inoc_scaffold_24_262
unknown

Not on your lists

280320..280745
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_24_263
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280780..281868)
DNA (1089bp) protein (363aa)
ABC-type multidrug transport system, permease component n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EQL8_STEMA rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr
ABC transporter
scnpilot_p_inoc_scaffold_24_264
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(281865..282812)
DNA (948bp) protein (316aa)
ABC transporter ATP-binding protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036351DF rbh
ABC-type multidrug transport system, ATPase component Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_24_265
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(282812..283789)
DNA (978bp) protein (326aa)
Hemolysin D n=1 Tax=Rhodanobacter denitrificans RepID=I4WYF3_9GAMM
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG90025.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter
scnpilot_p_inoc_scaffold_24_266
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(283782..284525)
DNA (744bp) protein (248aa)
Regulatory protein TetR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0D2_9GAMM
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM53481.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_24_267
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284649..285689
DNA (1041bp) protein (347aa)
ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E53CCD rbh
PhoH {ECO:0000313|EMBL:AHY59595.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
PhoH family protein
scnpilot_p_inoc_scaffold_24_268
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285778..286215
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262ADD6
Uncharacterized protein {ECO:0000313|EMBL:KHS08379.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonop
hypothetical protein
scnpilot_p_inoc_scaffold_24_269
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286272..286757
DNA (486bp) protein (162aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1333853 species="Bacteria; P
Endoribonuclease YbeY n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CXK6_STEMA rbh
putative metalloprotease
scnpilot_p_inoc_scaffold_24_270
unknown

Not on your lists

286832..287347
DNA (516bp) protein (172aa)

This feature has no annotations

Displaying items 241-270 of 496 in total

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