ggKbase home page

scnpilot_p_inoc_scaffold_24_8

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(6423..7067)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1552758 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 200.0
  • Bit_score: 309
  • Evalue 3.80e-81
Uncharacterized protein n=3 Tax=Xanthomonas RepID=Q8PJK4_XANAC similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 212.0
  • Bit_score: 302
  • Evalue 4.40e-79
  • rbh
16S rRNA m(2)G-966 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 212.0
  • Bit_score: 302
  • Evalue 1.20e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthomonas sp. Nyagatare → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCCCCGTCCACCACGATCCTCCGCCCCGGCATCCCGGCGTCCCGCGCATGGCGGGGAAGGGCAGGTGCGCATCATCGGCGGCCGCTGGCGCAATACGCGGCTGCAGGTGCCGTCGCTGGAGGGCCTGCGCCCGACCAGCGACCGCGTGCGCGAGACCCTGTTCAACTGGCTGATGCCCAGGCTGCCCGGTGCGCGGGTGCTGGATCTGTTCGCCGGCAGCGGCGCGCTGGGGCTGGAGGCGGTGTCGCGCGGCGCTGCCTCGGCGCTGCTGGTCGAACGCGATCCGGCGCTGGTCGCGGGGTTGCGCGGCGTGGTCGAGCGGCTCGGTGCCGCCGGCCAGGTGCAGGTCGCCGCCGGCGATGCGCTGCGCTGGCTGGAAACCGCCGCGCCGGCGCAGGCCGACATCGTGTTCATCGACCCGCCGTTCGCCGCCGGCCTGTGGCCGCAGGTGTTCGAGCGGCTGCCGCGGCACCTGGCCGCGGACGCGTGGCTGTACGTGGAGGCGCCCGCGGACGCCGTGCCGCAGGTGCCTGCAGGCTGGCGCCTGCACCGCGAGGGCGGCACCCGCGACGTCGGTTATGCCCTGTACGTTCGCGCCGCTGCTACACTTCACGACGACCTGAACGCGACTCCGTCCGCATGA
PROTEIN sequence
Length: 215
MPRPPRSSAPASRRPAHGGEGQVRIIGGRWRNTRLQVPSLEGLRPTSDRVRETLFNWLMPRLPGARVLDLFAGSGALGLEAVSRGAASALLVERDPALVAGLRGVVERLGAAGQVQVAAGDALRWLETAAPAQADIVFIDPPFAAGLWPQVFERLPRHLAADAWLYVEAPADAVPQVPAGWRLHREGGTRDVGYALYVRAAATLHDDLNATPSA*