ggKbase home page

scnpilot_p_inoc_scaffold_24_163

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 183238..184032

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide core oligosaccharide biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000309A7DD similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 264.0
  • Bit_score: 441
  • Evalue 5.70e-121
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY58297.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 264.0
  • Bit_score: 438
  • Evalue 8.80e-120
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 265.0
  • Bit_score: 430
  • Evalue 2.80e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGATCACGGTCTCCCCGGAGAACTTTGAAAGCCAGATCGCCTGGCTGGCCGCCGATGGCTGGACCGCGCTGACGATGCAGGAGTACGCCGGCTTCCTCGCCGGCGTGCCGGTACCACGCAAATCGATCCTGATCACCTTCGACGACGGCTACCTGGACAACTGGGTCTACGCCCACCCCATCCTGCAGAAGTACGGCATGCGCGCGGTGGTGTTCCTGGTCACCGGCTGGATGGGCCAGGGCGAGGTACGGCCGCACGCCGGCCAGCAGGGCGCGGCATTGCCGCCCACGCCGGACCACCGCGGCTGCGAGGATGCGATCTTCCGCCTGGACCGCGCCGACGAGGTGATGATGCGCTGGAGCGAGGCGCGCGCGGCCATCGCCGCCGGCACCTTCGAAATGCACTGCCATACCCATACGCATACCCGCTGGCTGCGCAGGCCGGTCAGCCGCGAGGAGAAATGCGCCGGCATCCGCAACGACCTGGTGCGGGCGCGCGAGCAGCTGCTCGGCGAGCTGGGCGAAGCCTCCGACACCCTGTGCTGGCCCTATGGCGATTTCGACGAGGACTACGTGCGGATCGCGCGCGAACTCGGCTTCCGCTACCTGCACACCACCCATCCGTTCGGCCGCAACCTGGTGGGCGGCGATCCGGAGCACATCTACCGTTTCGCGATCCGCAACCGCCCCGCGAAGTGGCTGCGCAAGCGCATCGCCAGCAGCTACAACCCGGTGATCGCGCCGCTGTTCAACCGGTTCAAGGCGCACCGCCGGGGCATGGTCGCCGGGCCGTGA
PROTEIN sequence
Length: 265
MITVSPENFESQIAWLAADGWTALTMQEYAGFLAGVPVPRKSILITFDDGYLDNWVYAHPILQKYGMRAVVFLVTGWMGQGEVRPHAGQQGAALPPTPDHRGCEDAIFRLDRADEVMMRWSEARAAIAAGTFEMHCHTHTHTRWLRRPVSREEKCAGIRNDLVRAREQLLGELGEASDTLCWPYGDFDEDYVRIARELGFRYLHTTHPFGRNLVGGDPEHIYRFAIRNRPAKWLRKRIASSYNPVIAPLFNRFKAHRRGMVAGP*