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scnpilot_p_inoc_scaffold_24_286

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(305979..307061)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9F8_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 355.0
  • Bit_score: 243
  • Evalue 3.10e-61
Uncharacterized protein {ECO:0000313|EMBL:KGI76813.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 334.0
  • Bit_score: 259
  • Evalue 7.70e-66
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 355.0
  • Bit_score: 243
  • Evalue 8.80e-62

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Taxonomy

Oleiagrimonas soli → Oleiagrimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGTCCTGCCGTACCCGTTTCCTTCCGGCGCTGCCGTTCGGCCTGGCGCTGCTGCTGGCCAGTTGCACCGCGGTGGCTGCCGCCGCACCTGCGGCGATCCGCATGCCGGCCGAGCAGGCGCGCGCACTGGGCGTGCGCAACGCGGCGGCGGTCGCAGCCACCGGCATTCCGCTCGAACACCTGCCGGCGACGGTGGAACCGGCGCTGGAACGCAGCGCGGTGGTGACCGCGCCCTACGCCGGTACGGTGACCCGGGTGCTGGCGGTCGAAGGCAGCCAGGTCGCCGCCGGTGCGCCGCTGGCGCGGGTGCAAAGCCGCGAACGGATGATGCTCGAGGCCGATGCCGGGCGCGCGGCCAGCGAAGCACGCCTGGCGGCGCGGCAGGCGCGGCGCGATGCCGACCTGCTGGCCGAGGGCATCGTGCCGGCCGCGCGTGCCGAGAGCAGCCGCGCGCTGCGGGAGCAGACCGGGGCCACGCAGGCGCAGTTCGCACGGGCGCTGGCGCTGGCGCCGGCGGCCAGGGGCGGGCTGCCGGGCGAATACGAACTGCGCGCACCGCTGGCCGGGCGCGTGCTCGAACGCAAGGTGGCGCCGGGGCAGGCGCTGGAGGCGATGGCCGCCGCGTTCGTGGTGGCCGATACCTCGCAGCTGGACGTGGCCATCCGCGCGCCGGCGGCAGCACGCATGCGCCTGGCGGCCGGGCAGGTGGCGCGCATCGACGGCACCGATGCGCGCGGCCGGATCACCGCCGTGGGCAGTGCGGTCGATGGCGCCAGCCAGACCGTGCCGGTGCGCGCACGCTTCGAGGCCAGCAGCGTGCTCGTGCCGGGCCAGCCGGTGGCGGTGACACTGGAACTGCCGGCACCGCAGGGGGCGCTGGCGCTGCCGCGCGGCGCGTTGGCACGGGTGGGACGCGACAGCGTGGTGTTCGCCGCCACGACTGGCGGCTACCGGGTGGTGACCGTCGAGGTGCTGGGCGAATCGGCGACCCAGGTGGTGGTGCGCGGGCCGCTCGCGGCCGGCACGGCGGTGGCGGTGGCCGGTACCAGCGCATTGAAGGCGCTGCTGGCGGCCGGGGAGTAA
PROTEIN sequence
Length: 361
MSCRTRFLPALPFGLALLLASCTAVAAAAPAAIRMPAEQARALGVRNAAAVAATGIPLEHLPATVEPALERSAVVTAPYAGTVTRVLAVEGSQVAAGAPLARVQSRERMMLEADAGRAASEARLAARQARRDADLLAEGIVPAARAESSRALREQTGATQAQFARALALAPAARGGLPGEYELRAPLAGRVLERKVAPGQALEAMAAAFVVADTSQLDVAIRAPAAARMRLAAGQVARIDGTDARGRITAVGSAVDGASQTVPVRARFEASSVLVPGQPVAVTLELPAPQGALALPRGALARVGRDSVVFAATTGGYRVVTVEVLGESATQVVVRGPLAAGTAVAVAGTSALKALLAAGE*