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scnpilot_p_inoc_scaffold_24_310

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(330502..331080)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FDD69F similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 193.0
  • Bit_score: 287
  • Evalue 7.70e-75
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 193.0
  • Bit_score: 286
  • Evalue 6.30e-75
RNA polymerase sigma factor {ECO:0000313|EMBL:AAM40604.1}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas ca similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 193.0
  • Bit_score: 286
  • Evalue 3.10e-74

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Taxonomy

Xanthomonas campestris → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCTCGACGCCACCGTGACCGCCACCGCCCCTTTTCCGCAGGCTGCCGACGACGCCGCGCTGGCGCGTGCCGCCGCCGCTGGCGACAGCCATGCCTACGAGCGCATCTACCGCCGCCACGCCCCACGCCTGTACGCGCTGCTGTGGCGACTGTGCGGTGGCAGCGCGGCGCGCGCCGAGGACGCGCTGCAGGAGACCTTCATCCAGGCCTGGCGCAAGTTGCCGCAGTTCCGTTTCGAGAGCGCGCTGGGCACCTGGCTGCACCGCATGGCGGTGAACACGGCGCTGATGGAGCTGCGCGCCAGTGCCGCGTTCGAGGCGCTGGACATCGGCGAGGGCGGCATGCACGTGCTGGCGCAGATGCCGGCGTCCAGCCGCTGCCAGGCCACCGGGCTGGACCTGGAGCGCGCGCTGGAGACCCTGCCGCCGCGCGCCCGTGCGGTGCTGGTACTGCACGACATCGAGGGCTGGAAACACCACGAGATCGCCGAGGAACTGCAGATGGCCGTCGGCAGTTCCAAGGCACAGCTGCATCGCGCGCGCGGATTGTTGCGCGCGCGTCTGGGAGAAACACCATGA
PROTEIN sequence
Length: 193
MLDATVTATAPFPQAADDAALARAAAAGDSHAYERIYRRHAPRLYALLWRLCGGSAARAEDALQETFIQAWRKLPQFRFESALGTWLHRMAVNTALMELRASAAFEALDIGEGGMHVLAQMPASSRCQATGLDLERALETLPPRARAVLVLHDIEGWKHHEIAEELQMAVGSSKAQLHRARGLLRARLGETP*