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scnpilot_p_inoc_scaffold_24_400

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(431495..432010)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U4C7_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 289
  • Evalue 3.10e-75
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadacea similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 289
  • Evalue 4.30e-75
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 169.0
  • Bit_score: 288
  • Evalue 1.50e-75

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAAGAAAGATTCCGAGCGCCGGATCCTGCTGGGCAGGGTGACCGGCGCTTTTGGTGTGCGCGGCGAGCTCAAGCTCGAGTCCTGGACCGAGCCGCGGCTGGCCATTTTCAACTATCAGCCCTGGATCCTGCGCAGCCCCTCGGGGCAGGAGTCGCAGATCACCGGCGTGCGCGGCCGCGAGGCCGGCAAGACGCTGGTGGCGACCTTCCCCGGGGTGGACGACCGCAACATGGTCGAGGCCATGCGCGGTACCGAGATCCATATCCCGCGCAGCGCGCTGCCGCCGCCCAGGCCGGACGAGTACTACTGGGTCGACCTGGAGGGCCTGGACGTGCAGACCGTGGACGGCGTCAAGCTGGGCCGCGCCTCGCACCTGTTCAACACCGGCGCCAACGACGTGCTGGTAGTGCGCGGCGACCGCGAGCGCATGGTGCCGTTCGTGATGGACGATTTCGTCAAGTCGGTCGATTTCGACGCCAACCTGATCGTGGTCGACTGGGATCCGGAGTTCTGA
PROTEIN sequence
Length: 172
MKKDSERRILLGRVTGAFGVRGELKLESWTEPRLAIFNYQPWILRSPSGQESQITGVRGREAGKTLVATFPGVDDRNMVEAMRGTEIHIPRSALPPPRPDEYYWVDLEGLDVQTVDGVKLGRASHLFNTGANDVLVVRGDRERMVPFVMDDFVKSVDFDANLIVVDWDPEF*