ggKbase home page

scnpilot_p_inoc_scaffold_38_198

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 224439..226676

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor {ECO:0000313|EMBL:KGO99170.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 753.0
  • Bit_score: 1103
  • Evalue 0.0
TonB-dependent receptor id=2528236 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 761.0
  • Bit_score: 931
  • Evalue 6.70e-268
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 772.0
  • Bit_score: 569
  • Evalue 1.40e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2238
ATGAAACGCAAGTATCTGAGCATGGCCGTGGGCTGTGCACTGCTGGCCCCGGCCGCGTTCGTGCAGGCCGAGGAACAGCAGCCGGCCGGCCACCAGCAGGCCACCCAGCTGGACGAAGTCACCGTGACCGCGCGCCGTCGCGCCGAGTCCATCCAGGACGTGCCGGTGGCGGTGTCGGCCTTCGGCGAGGAGCAGATCAAGGATCTGCAGGCCTCGACCGTGGAGGGGCTGCAGGGGGCGGTGCCGAACATGAACATCGCCCAGGGCCGCGGTTCGGCCAACAGCGTCAACGTGTTCATCCGTGGCATCGGCCAGCCGGATGCGCTGCAGACGTTCGATCCGGGCGTGGGCATGTACGTGGACGACGTCTACTACTCGCGCATCAACGGCGCGCTGTTCTCGCTGTTCGACATCCAGCAGCTGGAAGTGCTGCGCGGCCCGCAGGGCACCCTGTACGGCAAGAACTCCACCGGCGGCGCGATCAAGCTGACCACCAAGAATCCGTTCGACAACGAGGGCGGCGCGGTGGAAGTCACCGCCGGCGACTACGGCCGCCTGGAAGGCCGCTTCTACGTCTCGGGCAAGCTCAGCGACACCATCGCCGCCAGCATCGCCGGTGCCAAGATCACCAACGACGGTTACGTCAAGGACGCCGAGACCGGCAAGCGCTACAACGACGACGACACCGAGGCGCTGCGCTTCAAGATGGCGTTCAATCCGACCGACAGCTTCCGTGCCACGCTGTCGCTGGACACCACCAAGCAGGACGCGGCGCTGACCCTGGGCCGGCCGATGGCCAACCTGCGCCAGACCAGCCTCGCGCCGGCCGGCGTGATCGTGCTCAAGCCGGGCGAGACCGGCGAATGGAACCGTCGCGCCCTGACCTCGTTCAAGAATGGCGAGGGCCAGTACCTGAAGCACTCCGGCGCGTCGCTGGCGATGGACTGGGACATCAACGCGCAGTGGACGCTCAAGAGCATCAGCTCCTACCGCAAGCTCAAGACCAAGTCGTACATCGACATCGATGCCTCCGAGTACGAACTGGGCGACGTGCTGGTCGCGCTGAACCAGGACCAGAAGAGCCAGGAGTTCCAGCTGCATTACGACAACGGCTCCAACCTGCACGCCACCTTCGGCGCGTACTACATGAAGGAGAACGTGCCGTCCTACCAGGAGGCCTATGCCGACGACCTGTTCTCGTTCCTGGGGGCGAAGGTGCCGTTCCTGCGCACCATCAACGATGACCTGACCACCACCTCCAACGCCGCCTTCGCCCACCTCAACTGGGAGTTCGTGCCGAGCTGGACCGTGGCCGCGGGCGTGCGCTGGACCAAGGACAAGAAGGACTACGCCCGTTCCACCAGCACCTTCTGGGGCGCGCCGTTCACCGCCCTGAACGAAACCGTGGCCTTTGCCGCCAATGCCTCGTGGACCGCGGTCACGCCGTCGATCAGCCTGCAGAAGGCCTTCGGCGACAACCTGATGGGCTACGTGTCGGCCAACCGCGGCTTCAAGTCCGGCGGCTTCAACGGCCGCGCCAACACCAAGTACGACACCCAGCACGCCAAATTCGACCCGGAATACGTGTGGACCTACGAGCTCGGCCTGAAGGGCAGCTCGGCCGACCGCCGCTTCCGCGGCAGCGCGGCGGCGTTCTACAGCAACTACAGCGACTTCCAGGCGCGCGTCTCGCAGGACGTGGGCACCTTCCCGGTGCTGAACGCGGCCAAGCTCAACATCAAGGGCATCGAGCTCGAGGGCAGTGCGCTGCTGGGCGAGGCCACCACGCTGAGCGCGCAGATCGGCTGGATGGACGCCAAGTACGACAAGTTCGAGGACTTCCGCCTGGATCCGTCGTACCCGGGCTTCGATCCGAACGTGAACCATGACAACGTGCCGTTCTCGCCGGACTGGACCGCGCGCGTGGCCCTGCAGCACGTGTTCGCGCTGGGCGACAACGGCAACCTGACCTTCGGCGGCGATGTCTCCTACCGCGGCAAGACCTGGCTGAGCGTGGACAACCGTGCCGTGCTGAGCCAGGACGCCTACACCCTGCTGGGCGTCTACGGCGTGTGGGATTCGCCGCAGATGGCCTGGCAGGTGCGTGCCGGCGTGCGCAACCTGACCGACAAGGAATACAAGACCGAAGGCCAGGAGTTCGCCAGCGTGGGCAACATCCAGACCGCCTACTACGGCCTGCCGCGCAACTGGTACATGTCGCTGCGCTACAACTTCTGA
PROTEIN sequence
Length: 746
MKRKYLSMAVGCALLAPAAFVQAEEQQPAGHQQATQLDEVTVTARRRAESIQDVPVAVSAFGEEQIKDLQASTVEGLQGAVPNMNIAQGRGSANSVNVFIRGIGQPDALQTFDPGVGMYVDDVYYSRINGALFSLFDIQQLEVLRGPQGTLYGKNSTGGAIKLTTKNPFDNEGGAVEVTAGDYGRLEGRFYVSGKLSDTIAASIAGAKITNDGYVKDAETGKRYNDDDTEALRFKMAFNPTDSFRATLSLDTTKQDAALTLGRPMANLRQTSLAPAGVIVLKPGETGEWNRRALTSFKNGEGQYLKHSGASLAMDWDINAQWTLKSISSYRKLKTKSYIDIDASEYELGDVLVALNQDQKSQEFQLHYDNGSNLHATFGAYYMKENVPSYQEAYADDLFSFLGAKVPFLRTINDDLTTTSNAAFAHLNWEFVPSWTVAAGVRWTKDKKDYARSTSTFWGAPFTALNETVAFAANASWTAVTPSISLQKAFGDNLMGYVSANRGFKSGGFNGRANTKYDTQHAKFDPEYVWTYELGLKGSSADRRFRGSAAAFYSNYSDFQARVSQDVGTFPVLNAAKLNIKGIELEGSALLGEATTLSAQIGWMDAKYDKFEDFRLDPSYPGFDPNVNHDNVPFSPDWTARVALQHVFALGDNGNLTFGGDVSYRGKTWLSVDNRAVLSQDAYTLLGVYGVWDSPQMAWQVRAGVRNLTDKEYKTEGQEFASVGNIQTAYYGLPRNWYMSLRYNF*