ggKbase home page

scnpilot_p_inoc_scaffold_38_368

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(411094..412302)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037C98AC similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 402.0
  • Bit_score: 477
  • Evalue 1.10e-131
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 397.0
  • Bit_score: 487
  • Evalue 2.50e-134
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 399.0
  • Bit_score: 456
  • Evalue 7.40e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGACCGCTGCCACGCTCGAATCCCTGCTGCACCGCGAACTGCCCGCCGCCCGCGGTGGCTGCACCCAGTCCTACGGGCGCATCGTGGTGGCCTGCCAGAACACGGTGACCGCCATCGCCCTGGCCATCACCCGCGACGTGCAGGCCAGCGAGGACATCGCCCAGGAAGCCTTCATCAAGGCCTGGCAACAGCTCAACCAGCTCAACAACCCCTCCAGTTTCCTGCCCTGGCTGCGGCAGATCACCCGCAATCTCGCCCGCGACTGGCTGCGCGCCAACCGCAACCGCCCGCTCAGCGGCCAGGCGGCCGAGATCGCCATCGGCATGGCCGCCGACCCCACCCCCGATGCCGCCGAAACCATGGCGCGGGTGGAGGAGGAACTGGTCGCCGAGGAAATCATCTCCGCCCTGCCCGAGGACAGCCGCGAGGCACTGCTGCTGTTCTACCGCGAGGGCCAGAGTTCGCAACAGGTCGCCGCGCTGCTGGGATTGAGCGACGCGGCGGTGCGCAAGCGCCTGTCGCGCGCGCGCGCCACCGTGCGCGAGGAAATGCTGCGTCGCTTCGGCGAGTTCGCGCGCAGCAGCGCGCCGGGCACCGCGTTCGCCGCCACCATCGGCTCGCTGCTGATGGTGGCCGCGCCCGGCACCGCCAGCGCCGTGGTGATCGGCAGCAGCGCCGGCCTGGCCGGCGCGGGCAAGCTCGGCGCCGGCGGCATGGGCGCCAGCGCCGTGGGCGGCGGTGCGGCGGGCGGTTCCGTCGGCATGCTGGCCAACACGCTGATGGCCGATGGCTTCAACTTCGGCCTGGCCCTGGGCGCCACCATCGGCGGCACCGCGGCCGCCTGGGTGGGCGGGTTGTACCTGCTGCACTACGCCGAATCGGCCGCCGAGCGCGCACAGGTACAGCGCTTCATGCGCCTGCACACCGCCACCGCCGCGCTGTTCTGCGGGAGCACGCTGCTGGTGGTGGTGCTGCACCTGGGGCTGGTGGTGTCGCTGGCGACGCTGCTGGTGGGTATGTGCGCGATCAACTACCAGTACCTGGTGACGCTGCCGCGGATCATGGGCCCGATGCTTGCCCGCGATGCCGCCCGCCACGGCCGCAGCGGCCCTACGCGCCTGTACAACAGCCTGTTCGGCCGCAGCGCGGTGGCCGTGTCCAGCGTGCTGGTGGTCGCCGCGGTGCTGTACGTGCTGCTCGCGCGTTGA
PROTEIN sequence
Length: 403
MTAATLESLLHRELPAARGGCTQSYGRIVVACQNTVTAIALAITRDVQASEDIAQEAFIKAWQQLNQLNNPSSFLPWLRQITRNLARDWLRANRNRPLSGQAAEIAIGMAADPTPDAAETMARVEEELVAEEIISALPEDSREALLLFYREGQSSQQVAALLGLSDAAVRKRLSRARATVREEMLRRFGEFARSSAPGTAFAATIGSLLMVAAPGTASAVVIGSSAGLAGAGKLGAGGMGASAVGGGAAGGSVGMLANTLMADGFNFGLALGATIGGTAAAWVGGLYLLHYAESAAERAQVQRFMRLHTATAALFCGSTLLVVVLHLGLVVSLATLLVGMCAINYQYLVTLPRIMGPMLARDAARHGRSGPTRLYNSLFGRSAVAVSSVLVVAAVLYVLLAR*