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scnpilot_p_inoc_scaffold_38_388

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 432176..434098

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=216778 species similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 667.0
  • Bit_score: 1017
  • Evalue 1.10e-293
RNA helicase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000300A86F similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 658.0
  • Bit_score: 1010
  • Evalue 5.70e-292
  • rbh
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 665.0
  • Bit_score: 993
  • Evalue 2.00e-287

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1923
ATGTCCCAAGAATCCCCCGCGCCGCTGCTGTTCGCAGACCTCGGCCTGTCCGACGCTGTGATGAAGGCCGTGGCCGCCGTCGGCTACGAGACGCCGTCGCCGATCCAGGCCGCCACCATCCCGGCGATGCTGCAAGGCCGCGACGTCCTCGGCCAGGCGCAGACCGGCACCGGCAAGACCGGCGCCTTCGCGTTGCCGGTGCTGTCCAACATCGACATTTCCGCCACCAGACCGCAGGTGCTGGTGCTGGCCCCGACCCGCGAACTGGCCATCCAGGTCGCCGAGGCCTTCCAGAGCTATTCGGCGTCGATGCCCGGCTTCCGCGTGCTGCCGGTGTACGGCGGCCAGCCCTACGGCCAGCAGCTGTCGGCGCTGCGTCGCGGCGTGCACGTGGTGGTCGGCACCCCCGGCCGCGTCATCGACCACCTGGACCGCGGCACGCTGGACCTGTCCGAGCTGAAGACGCTGGTGCTGGACGAGGCCGACGAAATGCTGCGCATGGGCTTCATCGACGACGTCGAAGCCGTGCTCAAGAAGCTGCCGGAAACCCGCCAGGTCGCGCTGTTCTCGGCGACCATGCCGTCGCAGATCCGCCGCATCGCGCAGACCTACCTGCGCGACCCGGTGGAAGTGACCATCGCCTCCAAGACCACCACCTCGGCCAACATCCGCCAGCGCTACTGGTGGGTGAGCGGCATGCACAAGCTCGATGCGCTGACCCGGATCCTGGAAGTGGAACCGTTCGACGCGATGATCGTCTTCGCGCGTACCAAGGCCGGCACCGAGGAACTGGCCGAGAAGCTGCAGGCGCGCGGCCTGGCCGCCGCGGCCATCAACGGCGACATGCAGCAGGCCCAGCGCGAGCGCACCATCGGCCAGCTGAAGGAAGGCAAGCTGGACATCCTCGTCGCCACCGACGTGGCCGCGCGCGGCCTGGACGTGGAGCGCATCAGCCACGTGCTGAACTACGACATCCCGTACGACACCGAAAGCTACGTGCACCGCATCGGCCGCACCGGTCGCGCCGGGCGCAGCGGCGAGGCGATCCTGTTCGTCACCCCGCGCGAGAAGGGCATGCTGCGCCAGATCGAGCGCGCCACCCGCCAGCCGATCGAGGAAATGCAGCTGCCGACGGTGGATGCGGTCAACGACCACCGCGTGGCCAAGTTCATGGAGCGCATCAGCCAGACCCTGGCCGATGGCGACACCGATTTCTACCGCGACCTGGTGCAGCGCTACGAGAACGAGCACAACGTGCCGGCGGTGGAGATCGCCGCCGCGCTGGCGCGCCTGCTGCAGGGCGATGCCCCGTTCCTGCTGGCCCCGCCGGTGCGCGAGCGCCGCGAGCCGCCGGCCGGGCGCAACGAGCGTCCGGCGCGCGATGGCGGTTTCCCGCGCCACCGCGAGGACCGTGGCGAGCGCCCGGCGCGGTTCGAGCCGCGCTTCGAGCGTGCCCCGCAGGCGGATGACGGCGAGCGCCCGGCGCGCGCCGAAGGCGCCTTCGAGCCGCGCCAGCGCCGTGAGATGCCGCCGCGCGGCGCGCCGGAATTCGGCATGGAGACCTACCGCATCGAGGTCGGCCACATGCACGGCGTGAAGCCTGCCAACATCGTCGGCGCCATCGCCAACGAGGCCGGGCTGGAGAGCCGCTACATCGGCCGCATCGACATCCACGACGATCACTCGGTGCTCGACCTGCCGGCGGAAATGCCGGCCGATACCCTGCAGCACCTGCAGAAGGTATGGGTGTCGGGCCAGCAACTGCGCATGCGCAGGGTGGAACCGGGCGAAGCGCAGGATGCCGCACCGGCGTCCAAGCCGCGCTTCGGCAAGGGCCCCCGGCCTGCCGGGCGTCCCGGCGGTCCGCGGGCTCCGGGCGGGCGCCCGGGGGGCTTCAAGCCACGCGGTCCGCGCGGTGCCTGA
PROTEIN sequence
Length: 641
MSQESPAPLLFADLGLSDAVMKAVAAVGYETPSPIQAATIPAMLQGRDVLGQAQTGTGKTGAFALPVLSNIDISATRPQVLVLAPTRELAIQVAEAFQSYSASMPGFRVLPVYGGQPYGQQLSALRRGVHVVVGTPGRVIDHLDRGTLDLSELKTLVLDEADEMLRMGFIDDVEAVLKKLPETRQVALFSATMPSQIRRIAQTYLRDPVEVTIASKTTTSANIRQRYWWVSGMHKLDALTRILEVEPFDAMIVFARTKAGTEELAEKLQARGLAAAAINGDMQQAQRERTIGQLKEGKLDILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVTPREKGMLRQIERATRQPIEEMQLPTVDAVNDHRVAKFMERISQTLADGDTDFYRDLVQRYENEHNVPAVEIAAALARLLQGDAPFLLAPPVRERREPPAGRNERPARDGGFPRHREDRGERPARFEPRFERAPQADDGERPARAEGAFEPRQRREMPPRGAPEFGMETYRIEVGHMHGVKPANIVGAIANEAGLESRYIGRIDIHDDHSVLDLPAEMPADTLQHLQKVWVSGQQLRMRRVEPGEAQDAAPASKPRFGKGPRPAGRPGGPRAPGGRPGGFKPRGPRGA*