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scnpilot_p_inoc_scaffold_148_17

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 19977..20954

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rR similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 322.0
  • Bit_score: 435
  • Evalue 5.40e-119
Ribosomal RNA large subunit methyltransferase F n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZT35_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 335.0
  • Bit_score: 405
  • Evalue 4.30e-110
  • rbh
rlmF; Ribosomal RNA large subunit methyltransferase F similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 321.0
  • Bit_score: 388
  • Evalue 2.00e-105

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGCCGACGCCCCCGCACCCGGCAACGCGGCGCCCCGCGCCGGTGGTCGCGCGCCTGCATCCGCGCAACCGCCACCAGGGCCGTTATGACATGGCCCGGCTGGTGGCGGCCAACCCGGCGCTGCGTACGCACCTGCGGCGCGCCCCGGATGGTGGGCAGAGCATCGATTTCAGCGATCCGCTGGCGGTGCGCGAACTCAACCGCGCGCTGCTGGCCAGCGATTACGGCATCGCCCACTGGGACATTCCCACCGGCTACCTGTGCCCGCCGGTGCCGGGCCGGGTGGATTACCTGCATGGCCTGGCCGACCTGCTGGCCGCCGATGCCGGTGGCGCGATCCCGCGCGGCCCCGGGGTGCGCGTGCTCGATATCGGCGTGGGCGCCAACTGCATCTACCCGCTGCTCGGGCAGGCCGAGTACGGCTGGTCGTTCGTCGCCAGCGACATCGACGGCGCCGCCCTGCAGTCGGCCGCCGCCAATGTGCGCGGCAACGGCCTCGAGGGGGTGATCGAACTGCGCCGGCAGCACGCGCGCGGCAGCCTGTTCGCCGGCGTGGTGCAGGCACAGGACCGCTTCCACCTGACTCTGTGCAACCCGCCGTTCCATGCCTCGGCCAGGGAGGCCGCGCAGGGCAGCCAGCGCAAGCTGCGCAATCTTGGCGGCGACAAGACCGCGCCGCGCGGCAAGCCGCCGCTGTTGAACTTCGGCGGCCAGGCCAACGAACTGTGGTGTACCGGTGGCGAGGCCTCGTTCCTGCGGCGGATGATCCGCGAAAGCGTGGCCGTACAGGCGCAGGTGCTGTGGTTCAGCGCGCTGGTCGCCAAGCGCGAGCACCTGGCCGACATCCATCGGCAACTGGCCCGCTCCGGCGCGCTCGACGTGCGTGAAGTGGCGATGGCGCAGGGCAGCAAGCAGAGCCGTTTCGTCGCCTGGACCTTCCACCCTGCCGCGCGCAGGACGCGGTGGCTGGCGGGGTAG
PROTEIN sequence
Length: 326
MPTPPHPATRRPAPVVARLHPRNRHQGRYDMARLVAANPALRTHLRRAPDGGQSIDFSDPLAVRELNRALLASDYGIAHWDIPTGYLCPPVPGRVDYLHGLADLLAADAGGAIPRGPGVRVLDIGVGANCIYPLLGQAEYGWSFVASDIDGAALQSAAANVRGNGLEGVIELRRQHARGSLFAGVVQAQDRFHLTLCNPPFHASAREAAQGSQRKLRNLGGDKTAPRGKPPLLNFGGQANELWCTGGEASFLRRMIRESVAVQAQVLWFSALVAKREHLADIHRQLARSGALDVREVAMAQGSKQSRFVAWTFHPAARRTRWLAG*