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scnpilot_p_inoc_scaffold_227_26

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(28636..29997)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I0P3_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 454.0
  • Bit_score: 452
  • Evalue 5.50e-124
  • rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDR37447.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 460.0
  • Bit_score: 456
  • Evalue 4.10e-125
wzt; polysaccharide ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 456.0
  • Bit_score: 439
  • Evalue 1.00e-120

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Taxonomy

Burkholderia grimmiae → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGTCCTCTGAGATCGCACTGCGCGTCAACCATGTCAGCAAGGTATTCCGTGCGTACTCGAATCCGGCGAAGCGCCTCACCCACGCGCTCGGCATTCGCGCGAACACTGTCCTGAGGAAGGTCGGGCTGCCGCAGTTGGCGACCGACCACGACGCGATACAGGAGTTCGTCGCACTCGACGACATCAGCTTCGAAGTGATGCGGGGCCACACAACGGGCATTGTCGGACGCAATGGCGCCGGCAAGTCCACGCTGCTGCAGATCATCGCGGGCACGCTGGCCCCCAGCCAGGGCACGGTCGAGGTCAGCGGGAGGATCGCAGCGCTGCTGGAGCTCGGCTCCGGCTTCAACCCCGAGTTCAATGGCATCGAGAATGCCAGACTCAACGCCGCCATTCTCGGCCTCTCTCCGGAGGAAATCGACGCACGGATGGACTCCATCCTGGCATTCGCCGATATCGGCCACTTCGTGAACCGGCCGGTCAAGACCTATTCCTCCGGCATGATGGTTCGCCTCGCATTCGCCGTGCAGGCCCAGGTGGACCCGGAGATACTCATCGTCGATGAAGCCCTGGCCGTCGGCGATGCCAAGTTCCAGTCCAAGTGCTTTGCCCGGCTGGATGCATTGAAGGAAACGGGAACCTCCATCCTGTTCGTGTCCCACTCCACGGAACAGATCGTCAGTCACTGCGATGACGCCATCCTGATCGAGGGCGGGCAGCTGCGGCAGCGTGGCCAGCCGAAGGACGTGGTCCATACCTACCTGGACCTGCTGTTCGGCAAACCGCCGGCATCCACGCCCGCGGCGCGACAGGCGCCTCAATCCACGGAGCCTGTGCCTGCCGGCGCCCCCCCCGTGCTGGAAACGCGGGGCAACAGCTATGCCGACCAGCCCCACTACAACCCCTATGAGTTCCGATGGGGCGACGGTGCCGCGTGCATCGCCGACTTCAGACTGCTTGCCGATGGCGCCGAGGCGGCGCAGATCATCGCCGCGGGCACTTCGCTGCAGCTGGTGCTTGGAATATCGTTCGAACGCGCCATCAGTCGCCCGATCATGGGCCTGACGATCAAGTCGAAGGACGGCGTCACCGTCTTCGGGACAAACTCGGAACTGACCCGTTTCGCAGGCCTGCCCGCCTCGGTCGCGGAAGGCACGGAAATGCAGGTGGATATCCACTTCGAATGCAATCTTGGTCCCGGCGATTACTTCATATCGGTCGGCCTGGCCAGCCGCAAAGGCGAGGAGCTCGTCCCGCACGACCGGCGCTATGACTCCATACACTTCACCGTCACGGACGACGAGTGCTTCGGCTTCACCAAGCTACCGATGACTTTCAGCATCAAGGAACTACGGTCTTGA
PROTEIN sequence
Length: 454
MSSEIALRVNHVSKVFRAYSNPAKRLTHALGIRANTVLRKVGLPQLATDHDAIQEFVALDDISFEVMRGHTTGIVGRNGAGKSTLLQIIAGTLAPSQGTVEVSGRIAALLELGSGFNPEFNGIENARLNAAILGLSPEEIDARMDSILAFADIGHFVNRPVKTYSSGMMVRLAFAVQAQVDPEILIVDEALAVGDAKFQSKCFARLDALKETGTSILFVSHSTEQIVSHCDDAILIEGGQLRQRGQPKDVVHTYLDLLFGKPPASTPAARQAPQSTEPVPAGAPPVLETRGNSYADQPHYNPYEFRWGDGAACIADFRLLADGAEAAQIIAAGTSLQLVLGISFERAISRPIMGLTIKSKDGVTVFGTNSELTRFAGLPASVAEGTEMQVDIHFECNLGPGDYFISVGLASRKGEELVPHDRRYDSIHFTVTDDECFGFTKLPMTFSIKELRS*