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scnpilot_p_inoc_scaffold_190_109

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(126207..126521)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=5 Tax=Stenotrophomonas RepID=G0K0H4_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 104.0
  • Bit_score: 175
  • Evalue 3.00e-41
Ribosome hibernation promoting factor HPF {ECO:0000313|EMBL:AHY59987.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 103.0
  • Bit_score: 184
  • Evalue 9.10e-44
sigma 54 modulation protein/30S ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 104.0
  • Bit_score: 175
  • Evalue 8.50e-42

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGCGTATCGAAACGTTTGGCAAAGACGTGGAAGTCACCCCCGCCCTGAAGGAGTACGTGGAAACCAAGCTGCAACGGCTGGGCAAGCACTTCGACCAGCACTGTGAAGTCAGGGTGACCCTGTCGCTGCAGAAGAACGAGCACCATGTCGATGCCAGCGCCAATCTCCCCGGCCAGACCCTGCACGCCGAGGCCGGTGGCCAGACCATGTACGCGGCGATCGACGTGCTGGCCGACAAGCTGGACAGGCTGGTGATCAAGCACAAGGAAAAGCATCTGCCACACGCCTCCCATGCACTGCGCGACAATGGCTGA
PROTEIN sequence
Length: 105
MRIETFGKDVEVTPALKEYVETKLQRLGKHFDQHCEVRVTLSLQKNEHHVDASANLPGQTLHAEAGGQTMYAAIDVLADKLDRLVIKHKEKHLPHASHALRDNG*