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scnpilot_p_inoc_scaffold_190_144

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(163651..166041)

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030BF1F6 similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 804.0
  • Bit_score: 1161
  • Evalue 0.0
  • rbh
TonB-dependent receptor {ECO:0000313|EMBL:AER55675.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanth similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 806.0
  • Bit_score: 1147
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 806.0
  • Bit_score: 1147
  • Evalue 0.0
  • rbh

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Taxonomy

Pseudoxanthomonas spadix → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2391
ATGAACCGCAAGTCCAGTACGCTCGCCGTTGCCGTCGCCATCGCCCTCGGCCTCCCGGTTGCCCCTGCCTTCGCCCAGTCCGGCGCCCAGACGCTCGACACCGTGATCGTCACCGGTACCCGCGTGGCCGACCGCACCGTGGCCGAATCGCAGTCGCCCATCGACATCATCACCCCCGAGGTCCTGCAGGCCACCGGCTCGACCGAGCTGGCCACCGCGCTGTCGCGCGCCCTGCCCTCGCTCAACTTCCCGCGCCCGGCGCTGACCGACGGCACCAGCGGCGTGCGCCCGGCGCAGCTGCGCGGGCTGTCGCCGGACCAGGTGCTGATCCTGATCAACGGCAAGCGCCGGCACCTGTCCGGCCAGCTCAACGTCAACGGCAGCATGGGCCGCGGCTCCTCGGCCGTGGACCTGAACACCATCCCGGTGGCCGCGATCGAACGCGTGGAAGTGCTGCGCGACGGTGCCTCGGCCCAGTACGGCTCGGACGCCATCGCCGGCGTGGTCAACATCGTGCTCAAGGGCGCCGGCAAGGGCGGCAGCCTGGCGCTGGACCTGGGCCAGTATTCGGCCGGTGACGGCAGGCAGTACCAGCTCTCCGGCGATACCGGCGTCAGCTTCGCCGATGGCCGCGGCACGGTGCATTTCGCCGGCCAGCTCTCGCACCAGGACCGCACCAACCGCGCCGGCCCGTTCAACGCCTACGGCCTGCCGGGCAACCCGACGCCGAACACCGGCAACTACCCGGGCGTGGGCGTGAAGGCGTTCGTGGTCGGCGACCCGGAAGTCGATACCCGCGCCGTGTCGGCCAATGCCGGCTTCGATTTCAGCGACACCCTGCATGGCTACGCCACCGCCATCGCCAGCAACCGCGACATCACCTCGTTCGCGTTCTACCGTTCGCGCAACCACAACGCCGCGACCAAGCTGCTCTACCCCGACGGTTTCGTGCCGGAGATCAACCAGTACCTGAAGGACCGTTCGCTGGTCGCCGGCCTGAAGGGCAGCACCGAAGGCGGCTTCAACTGGGACGTGAGCTACAACTACGGCTACAGCCGCATCGACTTCGCCACCCGCAACACCATGAACTACGCGCTGGGCGCCAACAGCCCCACCCGCTTCCGCGACGGCGCGCTGGAGTACACCCACAACATCGTCAATGCCGATTTCTCGCAGGCGCTGGACTGGGGCCTGGCCTACCCGGTGACGCTGTCCTTCGGCGCCGAGTACCGCCAGGAGAAGTGGAACCAGTCGCCGGGCGAGCCGAACTCCTATTTCGGCAGCGGCGCGCAGGGCTTCGGCGGCTTCACCCCGATCAACGCGGTGCACGCCGACCGCCACAACTACGCCCTCTATGCCGGCCTCGAGGCCGACCTGACCGACAAGCTGTCGACCGGCGCCACCGTGCGCTACGAGGACTACTCGGACTTCGGCAGCAAGACCTCGGGCAAGCTCTCGGCCCGCTATGCGTTCACCGACACGGTGGCGCTGCGCGCCACCGTCTCCAACGGCTTCCGCGCGCCGTCGCTGGCCCAGCAGAGCTACCAGGTCATCACCAGCAACTACTCCAACGGCGTGTTCGTCGAGTCGGGCACCTTCCCCGCGACCAGCATCGTGGCGCAGGCGCTGGGTTCCAGGCCGCTGCAGGCGGAAACCTCCACCTCCTACAGCCTGGGCCTGGTGCTGCAGCCGGTCGAGCGCCTGTACCTGACCGTCGATGCGTTCCAGATCGACATCGACGACCGCATCCTGCTGTCGTCCACCATCAACACCAATCCGGCGACCAACGCGCTGCTGACCTCGCTGGGGATCAACAACGTCACCGCCTTCCGCTACTTCAACAACGCCGCCAACACCCGCACCCGCGGCGTGGACGTGGTCGGCAGCTACAACATCCCGCTGGCCGCCAGCGCCCTGGACCTGACCGCCAGCTACAGCTACAACAAGACCGATGTGAAGCGGCTGGCGCCGTCGCCGGGCGTGCTGACCAGCCTGGGCCTGACCACGCCGCTGGTGGCGCGCGACGAGATTGGCCGCCTGGAAAACGCCTTCCCGCGCGACAAGGCCATCGTCGGCGGCACCTGGACCCTGGAGCGCTGGGTGCTGGGCCTGAACGCCACCCGCTACGGCCGGTTCACCGTGCGCCAGACCAACCCGGCGTTCGACCAGAGCTACGACCCGCAGTGGGTGCTGGACGTGTCGGCCAGCTTCAAGCCGAGCGCGCAGTGGACGCTGACCGTGGGTGCGGACAACGTGCTCGATTCGCACCCGGACAAGGTCAACCCCGCGTTCACCAGCGTCAACGCCTGGGGCCAGATGCCCTACAGCAACTATGCGCCGGCCGGTTTCAACGGTGCCTATGTCTACGGCCGCATCGGCTACAAGTGGTAA
PROTEIN sequence
Length: 797
MNRKSSTLAVAVAIALGLPVAPAFAQSGAQTLDTVIVTGTRVADRTVAESQSPIDIITPEVLQATGSTELATALSRALPSLNFPRPALTDGTSGVRPAQLRGLSPDQVLILINGKRRHLSGQLNVNGSMGRGSSAVDLNTIPVAAIERVEVLRDGASAQYGSDAIAGVVNIVLKGAGKGGSLALDLGQYSAGDGRQYQLSGDTGVSFADGRGTVHFAGQLSHQDRTNRAGPFNAYGLPGNPTPNTGNYPGVGVKAFVVGDPEVDTRAVSANAGFDFSDTLHGYATAIASNRDITSFAFYRSRNHNAATKLLYPDGFVPEINQYLKDRSLVAGLKGSTEGGFNWDVSYNYGYSRIDFATRNTMNYALGANSPTRFRDGALEYTHNIVNADFSQALDWGLAYPVTLSFGAEYRQEKWNQSPGEPNSYFGSGAQGFGGFTPINAVHADRHNYALYAGLEADLTDKLSTGATVRYEDYSDFGSKTSGKLSARYAFTDTVALRATVSNGFRAPSLAQQSYQVITSNYSNGVFVESGTFPATSIVAQALGSRPLQAETSTSYSLGLVLQPVERLYLTVDAFQIDIDDRILLSSTINTNPATNALLTSLGINNVTAFRYFNNAANTRTRGVDVVGSYNIPLAASALDLTASYSYNKTDVKRLAPSPGVLTSLGLTTPLVARDEIGRLENAFPRDKAIVGGTWTLERWVLGLNATRYGRFTVRQTNPAFDQSYDPQWVLDVSASFKPSAQWTLTVGADNVLDSHPDKVNPAFTSVNAWGQMPYSNYAPAGFNGAYVYGRIGYKW*