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scnpilot_p_inoc_scaffold_211_113

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(123443..123748)

Top 3 Functional Annotations

Value Algorithm Source
integration host factor subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030DFC28 similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 101.0
  • Bit_score: 195
  • Evalue 3.60e-47
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=216778 species="Bacteria; Proteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 101.0
  • Bit_score: 195
  • Evalue 5.00e-47
ihfB; integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 101.0
  • Bit_score: 191
  • Evalue 1.10e-46

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGACCAAATCCGAGCTGATCGAAATCCTTGCGCGCCACCAGGCGCACTTGAAGGCCGATGATGTCGATCTGGCCGTGAAGTCGTTGCTGGAGATGATGGGCGGCGCGCTGGCTTCCGGCGACCGCATCGAGATCCGGGGCTTCGGCAGCTTCTCGCTGCACTACCGGCCGCCGCGCATGGGGCGCAACCCGAAGACCGGCGAATCGGTCGCCCTGCCGGGCAAGCACGTTCCCCATTTCAAGCCGGGCAAGGAGCTGCGCGAGCGCGTGAGCGACGTCGTGCCGCTGGAAAGCGACCCGGCCTGA
PROTEIN sequence
Length: 102
MTKSELIEILARHQAHLKADDVDLAVKSLLEMMGGALASGDRIEIRGFGSFSLHYRPPRMGRNPKTGESVALPGKHVPHFKPGKELRERVSDVVPLESDPA*