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scnpilot_p_inoc_scaffold_394_3

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(4498..4782)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CAT6_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 88.0
  • Bit_score: 145
  • Evalue 2.30e-32
Helix-turn-helix protein {ECO:0000313|EMBL:EGD17360.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardn similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 88.0
  • Bit_score: 144
  • Evalue 7.20e-32
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 79.0
  • Bit_score: 101
  • Evalue 1.10e-19

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Taxonomy

Xanthomonas gardneri → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTGTCCGAAAAGAGAGAGCTCCCCGTCTACAGCGTGCGTCTGCGCGAAGCGCGGGAGACCTATGGCATCTCGCAGCGCAATCTCGGCATCAAGGCCGGACTGGATGATTTCGTCGCCAGCACCCGCGTAAACCGCTATGAAACCGGCGTACACCAGCCCGACCTGCAGACCCTGCAGCGCATCGCCGACGTGCTCGACCTGCCGGTGGCGTACTTCTTCGCCGAGGACGACGCGCTGGCGGAACTGATCAAGGCATACAGGCGCGGCAAGTCGCGCAAGAGCTGA
PROTEIN sequence
Length: 95
LSEKRELPVYSVRLREARETYGISQRNLGIKAGLDDFVASTRVNRYETGVHQPDLQTLQRIADVLDLPVAYFFAEDDALAELIKAYRRGKSRKS*