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scnpilot_p_inoc_scaffold_360_103

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 111816..112475

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3H9_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 217.0
  • Bit_score: 368
  • Evalue 5.10e-99
Two component transcriptional regulator, winged helix family; K02483 two-component system, OmpR family, response regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 219.0
  • Bit_score: 387
  • Evalue 1.10e-104
Two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 217.0
  • Bit_score: 368
  • Evalue 1.40e-99

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Taxonomy

RLO_Burkholderiales_64_99 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCGTGTCCTGCTGATTGAAGACGATGACGTGCTCGGTGCAGCCGTGCGCGACCAGATTGCGAGCGATGGCCATTCTGTGGATTGGGTGCGCCGCCTGGATGCGGGAGACAGCGCGATCGCGGGTGTGCCCTACGACCTTGCCCTGCTCGATTTGATGCTGCCGGATGGCCGGGGCATTCCCTTCCTGCGGCGCCTGCGCGCGCGGGGCGTGGTCACACCGGTCATCATTCTGACGGCGCTGAATCAGGTGTCGGACCGGATCGAGGGGCTGAATGCTGGCGCCGACGATTACCTCGTCAAGCCGTTTGATCTGGCAGAGCTGTCGGCGCGCATCGGGTCGGTCGCGCGGCGGTACAGCGGCAATCCCAATCCCATCCTTACCCATGGGCCGCTACAGATCGACTTGGCCGCACGCAGCATCCGCCGAGACGGCCACTTGGTGCCGCTGACGGCGCGCGAATGGGCGTTGTTCGAGGCCTTTCTATCCCGGCCTGGCCAGTTGCTCTCGAAGACACAACTGGAAGAAAAGCTCTATGCCTTCGACACCGAGGTGGAGAGCAACACCATTGAGGTGCATGTCAGCCGCCTGCGCAAGAAACTGGGCGCCGAGATCATCGTGACCGAACGCGGACTGGGCTATCGGTTGGGGCACGCATGA
PROTEIN sequence
Length: 220
MRVLLIEDDDVLGAAVRDQIASDGHSVDWVRRLDAGDSAIAGVPYDLALLDLMLPDGRGIPFLRRLRARGVVTPVIILTALNQVSDRIEGLNAGADDYLVKPFDLAELSARIGSVARRYSGNPNPILTHGPLQIDLAARSIRRDGHLVPLTAREWALFEAFLSRPGQLLSKTQLEEKLYAFDTEVESNTIEVHVSRLRKKLGAEIIVTERGLGYRLGHA*