ggKbase home page

scnpilot_p_inoc_scaffold_1247_14

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 14212..16404

Top 3 Functional Annotations

Value Algorithm Source
Putative TonB-dependent receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV40_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 759.0
  • Bit_score: 967
  • Evalue 8.20e-279
  • rbh
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 763.0
  • Bit_score: 967
  • Evalue 3.00e-279
Putative TonB-dependent receptor {ECO:0000313|EMBL:EIM03332.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 759.0
  • Bit_score: 967
  • Evalue 1.20e-278

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2193
ATGATCAAGCCACTTACGGCCGCCATCGGCATGGCCCTGCTCGCCGGCATGAACGGTGCCGCCTGGGCGCAGGACGCCCAGGACAAGAACCAGGACAAGGCCGTCGACCTGGACCAGGTGATCGTCACCGGTACCCGCACCGCCACCGCCATCGACAAGATTCCCGGCGCCATCACCCTGGTGTCCAGGGAAGAAGTGCAGCGCACGCTGAGCCTGACCGAAGACGCGACCGCGGTGCTGGCCCGCACCGTCCCCGGCTACGCCGAGTCCTCGCAGGCCATGAGCAACACCGGCGAAACCCTGCGCGGCCGCATCGCGCTGCGCCTGTTCGACGGCATCCCGCAGGGCTCGCCGCTGCGCGAAGGCAACCGCAACGGCACCTTCACCGACATGGGCGTGGTGGGGCGCATCGAGGTGATCAACGGCCCGTCCGCTTCCGAAGGCATCGGCGCGGCCGGCGGCATCATCAACTACATCTCCAAGGTGCCGACCGTCGAAGGCCACGAGACGGAAGTGATCTCGCGCTACTCCACCCAGTTCGGCGACGACAGCGCCGGCTGGAAGCTGGGCGTGAACCATGCCTACAAGGGCGATGACGTGGATGCGCTGCTGAGCGCCTCGTACATCGACCGCGGCATCTCCTACGACGGCAATGGCCGCCGCATCGGCATGAACACCAGCGGCTCGACCTCCGACTCGGAGGCCCGCAACCTGTTCCTGAAGGCCGGCTACAACTTCGGCGAATCCGGCGCGCAGCGCCTGCAGGCCAGCTACAGCCGCTTCAAGATCGACGGCAAGGCCAACTACCACCAGGTCGAAGGCTGCCGCTACGACCCGGTGGCGTGCCCGGTGCCGACCACCAATACCTCCGAGCGTGGCGCCATCGCCGGCTCGCTGGCCGAATTCAACGATTTCAAGCAGTTCGCGCTGAACTACAGCAACGGCGACCTGTTCGGCGGCACCCTGGTGGCCGACTACTACTGGGCCGACCAGGCCATGCGCTACCTGCCGGAGAACGGTGACGACAAGCAGCTGGTCAAGGTCGGCGCCGGCTTCGACGAAAGCCAGCGCATCTACGACCAGTCCGAGATCACCTCGAAGAAGCAGGGCCTGCGCAGCTCGTGGACCCGCGGCGACATATTCGGCCTGGAAGGGCTGCAGCTGCGTGCCGGCGTGGACCTGGTCAAGGACGAGGCCGCGCAGCGGCTGGCGCTGACCAACCGCCTGTGGGTGCCGCCGATGAAGTACACCAGCACCGCGCCGTATGCGCAGCTGACCTGGGACATCGGCCCGGTGACCGTCAGCGGCGGCCTGCGCCGCGAAGACGGCGAGCTCAAGGTCGACAGCTACACCACCACCGCCTACCGCAACGGCGTGTTCGTGCAGGGCGGGGGGCTCAAGTACGCCGAGAACATGAAGAACCTCGGTGCGATCTGGCGCGTGACCGACGAGCTGTCGGTGTTCGCGTCCTACGGCGAAGGCTTCGGCCTGCCCAACATCGGCATCCCGCTGCGCAACATCAACGTGCCGGGGCAGTCGGTGGACCGCATCTCCGACCTGCAGGCGATCATCGTCGACAACCGCGAGTACGGCTTCAACTGGCGCGGCGACCGCGGCGCGCTGGGCATGTCCTACTACGACAGCCGTTCCGAGTTCGGCACCTCGCTGGCCATCGATCCGCGCAGCAATGACTTCATCCTCAGCCGCGCACCGACCCGCATCAAGGGCTTCGAGGCCAACGGCGAGTGGCGCTTCAGCGATGCCTGGAAGGTGACGGCGCTGTATTCGCGCATCCGCGGCACCACCGAGTACTACCCGGGCTCGGGCCTGATCAAGAAGATGGGCGTGCTGGACATCAACCCGGACAAGATTGGCGCCTCGGTGGCCTGGAACTTCCTGCCCGAGGCCAATGTCACCCTCGGCGCGACCAAGCTGCTCGACCGCGACCTGCGCGCCACCCACACCCGCCCGAGCGATGGCGCGGTGTATGCCAACGCGGAGAAGACCGAAGGCTACGTGCTGTTCGACCTGGTGGTGAACTACGACACCGGCCGCTACGGCAAGCTGTCGCTGGGCATCGAGAACCTGTTCGACAAGCAGTACATCCTGAGCTGGTCGCAGTTGCCCGGTTGGCAGAACTACTGGTCCGGCCGTGGTCGCATGGTCTCGCTGAGCCACAGCATCAAGTTCTGA
PROTEIN sequence
Length: 731
MIKPLTAAIGMALLAGMNGAAWAQDAQDKNQDKAVDLDQVIVTGTRTATAIDKIPGAITLVSREEVQRTLSLTEDATAVLARTVPGYAESSQAMSNTGETLRGRIALRLFDGIPQGSPLREGNRNGTFTDMGVVGRIEVINGPSASEGIGAAGGIINYISKVPTVEGHETEVISRYSTQFGDDSAGWKLGVNHAYKGDDVDALLSASYIDRGISYDGNGRRIGMNTSGSTSDSEARNLFLKAGYNFGESGAQRLQASYSRFKIDGKANYHQVEGCRYDPVACPVPTTNTSERGAIAGSLAEFNDFKQFALNYSNGDLFGGTLVADYYWADQAMRYLPENGDDKQLVKVGAGFDESQRIYDQSEITSKKQGLRSSWTRGDIFGLEGLQLRAGVDLVKDEAAQRLALTNRLWVPPMKYTSTAPYAQLTWDIGPVTVSGGLRREDGELKVDSYTTTAYRNGVFVQGGGLKYAENMKNLGAIWRVTDELSVFASYGEGFGLPNIGIPLRNINVPGQSVDRISDLQAIIVDNREYGFNWRGDRGALGMSYYDSRSEFGTSLAIDPRSNDFILSRAPTRIKGFEANGEWRFSDAWKVTALYSRIRGTTEYYPGSGLIKKMGVLDINPDKIGASVAWNFLPEANVTLGATKLLDRDLRATHTRPSDGAVYANAEKTEGYVLFDLVVNYDTGRYGKLSLGIENLFDKQYILSWSQLPGWQNYWSGRGRMVSLSHSIKF*