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scnpilot_p_inoc_scaffold_1810_8

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 4321..8514

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 999.99
  • Bit_score: 2566
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CC similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 999.99
  • Bit_score: 2566
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312F12B similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 999.99
  • Bit_score: 2567
  • Evalue 0.0
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4194
ATGACGTCCTATTCGTACACCGAAAAAAAGCGCATCCGCAAGGATTTCGGCAAGCAGCGCTCGATCCTCGAGGTGCCGTTCCTGCTGGCCATCCAGGTCGACTCCTACCGCGAGTTCCTGCAGGAGAACACTGACCCGGCCAAGCGCTCCGACCACGGCCTGCACGCCGCGCTGAAGTCGGTGTTCCCGATCTCCAGCTACAGCGGCAACGCCGCCCTGGAGTACGTGGGCTACAAGCTGGGCGAGCCGGTGTTCGACGAGCGCGAGTGCCGCCAGCGTGGCATGAGCTACGGCGCCCCGCTGCGCGTGACCGTGCGCCTGGTCATCTACGACAAGGAATCGTCCACCAAGGCGATCAAGTACGTGAAGGAGCAGGAGGTCTACCTCGGCGAAATCCCGCTGATGACCGACAACGGCACCTTCATCGTCAACGGTACCGAGCGCGTCATCGTTTCGCAGCTGCACCGTTCGCCGGGCGTGTTCTTCGACCACGACCGCGGCAAGACGCACAGCTCGGGCAAGCTGCTGTACAGCGCCCGCATCATTCCTTACCGCGGCTCCTGGCTGGACTTCGAGTTCGACCCGAAGGACGCGCTGTTCACCCGTATCGACCGCCGCCGCAAGCTGCCGGTGTCGATCCTGCTGCGCGCGCTCGGCTACAACAACGAAGAAATGCTCAACGAGTTCTTCGACATCAACACCTTCCACATCCTGCCGGAAGGCGAGGGCGTGCAGCTGGAGCTGGTGGCCGAACGCCTGCGTGGCGAGACCCTGGGCTTCGACCTGGCCGATGGCGACAAGGTCATCGTGGAAGCCGGCAAGCGCATCACCGCGCGCCACGTCAAGCAGCTGCAGGCCTCGGGCATCGCCGCGCTGGCCGTGCCGGACGACTACCTGGTGGGCCGCATCCTGTCGCATGACGTGGTCGACGCCAACACCGGCGAACTGCTGGCCCAGGCCAACGACGAGATCACCGAAGAGCAGCTGCAGAACTTCCGCAAGGCCGGCGTGGATGCGGTCGGCACCCTGTGGGTGAACGACCTGGACCGTGGCCCGTACCTGTCCAACACCCTGCGCATCGACCCGACCAAGACCCAGCTCGAGGCCCTGGTCGAGATCTACCGCATGATGCGCCCGGGCGAGCCGCCGACCAAGGACGCCGCGCAGAACCTGTTCCACAACCTGTTCTTCACCTTCGAGCGCTACGACCTGTCCACGGTCGGCCGCATGAAGTTCAACCGCCGTGTCGGCCGCAAGGAAGTCACCGGCGAAGCCGTGCTGTACGACAGCAAGTACTTCGGCGAGCGCAACGACGAAGAGTCCAAGCGCCTGGTCTCCACCCATGGCGACGGGTCCGACATCCTGGACGTGATCAAGGTCCTGACCGAGATCCGCAACGGCCGTGGCGTGGTGGACGACATCGACCACCTGGGCAACCGCCGCGTGCGTTCGGTCGGCGAAATGGCCGAGAACGTGTTCCGCGTGGGCCTGGTCCGCGTCGAGCGCGCGGTCAAGGAGCGCCTGTCGATGGCCGAGTCCGAGGGCCTGACCCCGCAGGAGCTGATCAACGCCAAGCCGGTCGCCGCTGCCATCAAGGAATTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTGACGCACAAGCGCCGCGTCTCGGCACTGGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAAGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACCATCGAAACCCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCCGTGTTCGCCCGCACCAACCAGTACGGTTTCCTCGAGACCCCGTACCGCAAGGTCGTGGACGGCAAGGTCACCGACGACGTCGAGTACCTGTCGGCGATCGAGGAGAACGAGTACGTCATCGCCCAGGCCAACGCCCTGACCGACGCCAAGAACATGCTCACCGAGCAGTTCGTGCCGTGCCGCTACCAGGGCGAGTCGCTGCTGAAGCCGCCGGCGGAAGTGCACTTCATGGACGTCTCGCCGATGCAGACCGTGTCGGTCGCCGCGGCGCTGGTGCCGTTCCTGGAGCACGACGACGCCAACCGCGCACTGATGGGCGCGAACATGCAGCGCCAGGCCGTTCCGACCCTGCGTGCGCAGAAGCCGCTGGTAGGCACCGGCATCGAGCGCGCGGTGGCGCGTGACTCGGGCGTGACCGTGAACGCCCGTCGTGGCGGCGATATCGTGCAGATCGACGCCGGCCGCATCGTGGTCAAGGTCAACGAGAACGAGATCACCGACGCGTCCGACGCCGGCGTCGACATCTACAACCTGATCAAGTACACCCGCTCGAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGACGTGATCGCCCGCGGCGACGTGCTGGCCGACGGCCCGTCGACCGACATCGGCGAGCTGGCCCTGGGCCAGAACATGCTGATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCCATCCTGCTCTCCGAGCGCGTGGTGGAAGAGGATCGCTACACCACGATCCACATCGAAGAGCTGACCTGCGTCGCGCGCGACACCAAGCTGGGGCCGGAGGAAATCTCGGCCGACATCCCGAACGTCTCCGAGCAGGCGCTGAACCGCCTGGACGAGAGCGGCGTGGTGTACATCGGTGCGGAAGTCCGCGCCGGCGACATCCTGGTGGGCAAGGTCACGCCGAAGGGCGAGAGCCAGCTGACCCCGGAAGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCTTCCGACGTTAAGGACAGCTCGCTGCGCGTGCCGCCGGGCATGGACGGCACCGTCATCGACGTGCAGGTCTTCACCCGCGACGGCATCGAGAAGGACAAGCGCGCGCGCCAGATCGAAGAGAACGAGATCAAGCGCGTCAAGAAGGACTTCGACGACCAGTTCCGCATCCTGGAAGCGGCGATCTACGCGCGCCTGCGCTCGCAGATCGTGGGCAAGGTGGCCAACGGCGGTGCCGGCCTGAAGAAGGGCGACACCATCACCGACGCCTTCCTGGATGGCCTGAAGAAGGCCGACTGGTTCACCCTGCGCATGAAGGACGAGGACGCCTCCGAGGCGATCGAGCGCGCCCAGAAGCAGATCCAGGCGCACGAGAAGGAGTTCGAGCGCCGCTTCGCCGACAAGCGCGGCAAGATCACCCAGGGCGACGATCTGGCCCCGGGCGTGCTGAAGATGGTCAAGGTGTTCCTGGCGGTGAAGCGCCGCATCCAGCCGGGCGACAAGATGGCAGGTCGCCACGGCAACAAGGGCGTGGTCTCCAACGTGGTGCCGGTCGAGGACATGCCGTACATGGCCGACGGCACCTCGGTGGACATCTGTCTGAACCCGCTGGGCGTGCCGTCGCGCATGAACATCGGCCAGATCCTCGAAGTGCACCTGGGCTGGGCCGCCAAGGGCCTGGGCCGGCGCATCCAGAAGATGCTGGAGCAGCAGCGTGCGGTGAACGAGCTGCGCGAGTTCCTCGGCAAGATCTACAACCACGACAGCAAGCTGGCCGGTGATCGCGTCGACCTGTCGCAGTTCAGCGACGAGGAACTGGTGGCGCTGGCCCGCAACCTGACCGACGGCGTGCCGATGGCCACCCCGGTGTTCGACGGTGCGCACGAGGACGAGATCCGCGAGATGCTGAACCTGGCATACCCGGACGGCGACAAGGACACCGAGCAGCTGGGCTTCAACGCCAGCAAGACGCAGATGCAGCTGTACGACGGCCGCACCGGCGAGGCGTTCGACCGCAAGACCACCGTCGGCTACATGCACTACCTGAAGCTGAACCACCTGGTCGACGACAAGATGCACGCCCGTTCGACCGGTCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAGATGGAAGTCTGGGCGCTGGAAGCCTACGGCGCGGCCTACACCCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGCAGGGCCGCAACCAGATGTACAAGAACATCGTCGACGGCGAGCACGAGATGGTCGCGGGCATGCCGGAATCCTTCAACGTGCTGGTGAAGGAAATCCGCTCCCTGGCCATCAACATGGAACTGGAAGACAACTGA
PROTEIN sequence
Length: 1398
MTSYSYTEKKRIRKDFGKQRSILEVPFLLAIQVDSYREFLQENTDPAKRSDHGLHAALKSVFPISSYSGNAALEYVGYKLGEPVFDERECRQRGMSYGAPLRVTVRLVIYDKESSTKAIKYVKEQEVYLGEIPLMTDNGTFIVNGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDALFTRIDRRRKLPVSILLRALGYNNEEMLNEFFDINTFHILPEGEGVQLELVAERLRGETLGFDLADGDKVIVEAGKRITARHVKQLQASGIAALAVPDDYLVGRILSHDVVDANTGELLAQANDEITEEQLQNFRKAGVDAVGTLWVNDLDRGPYLSNTLRIDPTKTQLEALVEIYRMMRPGEPPTKDAAQNLFHNLFFTFERYDLSTVGRMKFNRRVGRKEVTGEAVLYDSKYFGERNDEESKRLVSTHGDGSDILDVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVFARTNQYGFLETPYRKVVDGKVTDDVEYLSAIEENEYVIAQANALTDAKNMLTEQFVPCRYQGESLLKPPAEVHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERAVARDSGVTVNARRGGDIVQIDAGRIVVKVNENEITDASDAGVDIYNLIKYTRSNQNTCINQRPLVKVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVVYIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDKRARQIEENEIKRVKKDFDDQFRILEAAIYARLRSQIVGKVANGGAGLKKGDTITDAFLDGLKKADWFTLRMKDEDASEAIERAQKQIQAHEKEFERRFADKRGKITQGDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMADGTSVDICLNPLGVPSRMNIGQILEVHLGWAAKGLGRRIQKMLEQQRAVNELREFLGKIYNHDSKLAGDRVDLSQFSDEELVALARNLTDGVPMATPVFDGAHEDEIREMLNLAYPDGDKDTEQLGFNASKTQMQLYDGRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGEHEMVAGMPESFNVLVKEIRSLAINMELEDN*