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scnpilot_p_inoc_scaffold_225_3

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(1839..2519)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI00031CF0F3 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 225.0
  • Bit_score: 378
  • Evalue 6.60e-102
  • rbh
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 222.0
  • Bit_score: 360
  • Evalue 4.00e-97
Fis family transcriptional regulator {ECO:0000313|EMBL:KEP75125.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 222.0
  • Bit_score: 360
  • Evalue 2.00e-96

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGAAGGTCCTGGTCGCAGACGACGACCCGCAACTCGTGCGGGCCGTGCGCATCACTCTCGCCGCGCACGGTTACGACGTCGTGGCGGCGCCAGACGGACCGGCGGCAATAGCGCTCGCCGCCAAGGAGCACCCCGACGTGATCATGCTCGATCTCGGGATGCCGCACCTTGACGGGGTTGGGGTCATCCACGCCATTCGCGGCTGGAGCGAGGTGCCGATCATCGTCGTGTCGGGACGTTCGGGTTCCGCCGACAAGGTCGAAGCGCTGGATGCCGGCGCAGACGATTACGTCACCAAGCCCTTCCAGATCGATGAGCTCCTCGCACGCCTGCGCGCACTGACACGACGGTCATCATCGGCACCGGCGGGCGAATCCGTGGTGCGTTTCGGGGATGTCGAGGTCGATCTGTCAGCCAAGAGTGTTCGGCGCCGCGGCTCCCGTGTTCATCTGACTCCGACCGAATGGCGGATGCTCGAGTTCCTCGCCCGAAACCCCGGAAGCCTGGTAACACGGCAGACGCTACTGAAGACCCTCTGGGGGACCGAGCAGGTCACCGATACCGGCTACCTGCGTCTCTACATCTCGCAGCTGCGCAAGAAGCTGGAGGTCGACCCCGGCCACCCGGTCCACCTGTTGACTGAATCGGGTATGGGCTACCGACTCAACCTTGAGGGGTAA
PROTEIN sequence
Length: 227
VKVLVADDDPQLVRAVRITLAAHGYDVVAAPDGPAAIALAAKEHPDVIMLDLGMPHLDGVGVIHAIRGWSEVPIIVVSGRSGSADKVEALDAGADDYVTKPFQIDELLARLRALTRRSSSAPAGESVVRFGDVEVDLSAKSVRRRGSRVHLTPTEWRMLEFLARNPGSLVTRQTLLKTLWGTEQVTDTGYLRLYISQLRKKLEVDPGHPVHLLTESGMGYRLNLEG*