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scnpilot_p_inoc_scaffold_225_16

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(17286..17684)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Agromyces italicus RepID=UPI0003B4478D similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 139
  • Evalue 2.30e-30
GntR family transcriptional regulator {ECO:0000313|EMBL:KDA06495.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH1 similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 115.0
  • Bit_score: 136
  • Evalue 2.10e-29
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 114.0
  • Bit_score: 124
  • Evalue 1.70e-26

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGCTCCTCCGGATTGATCCCTCGCGGGATACCCCGCTGTGGGAGCAAATCGCTGGATCCGTCCGGGCGGAGATCGCCGGAGGGCGCCTGCGCGCGGGCGACCGGCTGCCGTCTGCGCGTGAGGTCGCAGCATCGCTCGATCTGAACCTGCACACCGTTCTGCGGGCCTATCAGCAGCTGCGTGACGAACGGCTCGTGGATCTGCGCCGCGGACGAGGGGCCCTTGTCACGGATGCCGCATCCGGGCTGCGTGACCTGCAGCGCGAGGTCCGCTCCCTCGCCGAGAGTGCCCGCCGGCGGGGAATTGCGCCCTCGGCCCTCGCCTCCCTGCTCACCGATGCCGATCCTCGCAGCTCTGCAGATAACTCGACCGATTCTTCCGAGGAGGAGATCCGATGA
PROTEIN sequence
Length: 133
MLLRIDPSRDTPLWEQIAGSVRAEIAGGRLRAGDRLPSAREVAASLDLNLHTVLRAYQQLRDERLVDLRRGRGALVTDAASGLRDLQREVRSLAESARRRGIAPSALASLLTDADPRSSADNSTDSSEEEIR*