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scnpilot_p_inoc_scaffold_286_1

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 1..954

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic subunit n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4JW84_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 172.0
  • Bit_score: 255
  • Evalue 7.00e-65
Transposase {ECO:0000313|EMBL:EWS99565.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 173.0
  • Bit_score: 260
  • Evalue 2.30e-66
transposase, IS30 family similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 172.0
  • Bit_score: 252
  • Evalue 1.30e-64

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 954
CCACGAACTGGAAACAAGCCCTCGAACAACTCGCACTCGCCTACCCCGACCGCATCACCCCCTACCTCTAACCACCAACACCAACCCGCTTACACAGAAGACTTGACAAGCCCCACTCCGTTGACCGGCCGGGTCATCCGCGCCTCGAAACAGACCGCCGTCCGATACGAACGCGCCCGGCCGGGTGAGCTGGTCCATATAGACGTGAAGAAACTGGGGCGTATCCCCGACGGCGGCGGGTGGCGCGCCCACGGCAGAGCCGCCGGCGACACGGCGGCCCATAAGCGGGCTCGGATCGGTTTCGACTACGTCCACTCGATGATCGATGACCACTCCCGGCTCGCATACTCCGAGATCCACCCCGACGAGAAGGGCGCGACCTGCGCCGGGTTCCTCACCCGGGCTGCGGCGTACTTCGCCGCGCACGGCATCACCCGCATCGAACGGGTCATGACCGACAACCACTTCAGCTACCGGCTCTCGAACGACTTCCAGACCGTCCTCCGCGGGCTCGGTGCGAAACACGTCCTCATCCGCCCGCACTGCCCGTGGCAAAACGGCAAAGTCGAACGCCTGAACCGCGTACTCTGCAAACCGAATGGGCCTACCGGCAGATCTTCACCTCTAACACCGCCCGCGCCGACGCCCTCGCACCCTTCATCGAGCATTACAACGCTCATCGCCACCACACCGCCATCAACGGCACACCCCTCAGCCGAGTGTTACCAACGTGACTGCCGAGTACAGCTAGCGGCGGGCCTCGCAACAGCCGCGCAGGCGGCGGGCCCGGTCCCGTGGCCGACGTGGCCACAAGAGAAGCCGGTACCCGCGTTCACGGCCATCGATCACGTCCTCGCGCGCGGGGCAGTTCCCACGGGGTGGGACAGTGCGTACATCGAGGGCAGCGATCACCGGGCGGTCATCGCGAACTGGGCCCTCTGCGACCTCACCTGA
PROTEIN sequence
Length: 318
PRTGNKPSNNSHSPTPTASPPTSNHQHQPAYTEDLTSPTPLTGRVIRASKQTAVRYERARPGELVHIDVKKLGRIPDGGGWRAHGRAAGDTAAHKRARIGFDYVHSMIDDHSRLAYSEIHPDEKGATCAGFLTRAAAYFAAHGITRIERVMTDNHFSYRLSNDFQTVLRGLGAKHVLIRPHCPWQNGKVERLNRVLCKPNGPTGRSSPLTPPAPTPSHPSSSITTLIATTPPSTAHPSAECYQRDCRVQLAAGLATAAQAAGPVPWPTWPQEKPVPAFTAIDHVLARGAVPTGWDSAYIEGSDHRAVIANWALCDLT*