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scnpilot_p_inoc_scaffold_321_1

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 3..119

Top 3 Functional Annotations

Value Algorithm Source
Integrase, catalytic region n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GGW9_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 38.0
  • Bit_score: 63
  • Evalue 6.20e-08
int; integrase similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 38.0
  • Bit_score: 63
  • Evalue 1.70e-08
Integrase, catalytic region {ECO:0000313|EMBL:AFV88180.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium ac similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 38.0
  • Bit_score: 63
  • Evalue 8.50e-08

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Taxonomy

Propionibacterium acidipropionici → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 117
AGATCAGCCACCTACGCCGACTGGCTCGAGGAATACAATCACCGACGACCCCACACCGCCCTCGGAGGCCACACCCCCACCTGCCGCCTTCACAACCTCACGGGTCGCTACACCTAG
PROTEIN sequence
Length: 39
RSATYADWLEEYNHRRPHTALGGHTPTCRLHNLTGRYT*