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scnpilot_p_inoc_scaffold_321_17

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 17215..17838

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2XKN2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 211.0
  • Bit_score: 293
  • Evalue 2.00e-76
LuxR family transcriptional regulator {ECO:0000313|EMBL:GAD33705.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS- similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 211.0
  • Bit_score: 293
  • Evalue 2.80e-76
putative two-component system, response regulator similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 211.0
  • Bit_score: 242
  • Evalue 8.60e-62

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGATCCGACTCCTGATCGCCGATGACCATCCCGTCGTGCGCGCGGGGCTCGCCGGCTTGTTCGCCGATGAGGAAGGCTTCGAGGTTGTCGGTCAGGCGGCCGATGGAGCCCAGGCGGTCGAGCTGGCAGCACGCGAGAAGCCGGATGTCGTGCTCATGGACCTGCGGATGCCCGTGATCGACGGTGTTGCAGCGACGGCTCGCATCGTCGCCTTTGGCGCCGACGCGCCGCGCGTGCTCATCCTCACGACGTATGAGAGCGACGATCAGATCCTGGCGGCGATCGAGGCGGGAGCTGCCGGTTACCTGCTCAAGGCAGCGCCGCAGGACGAGATCGTCGCGGGGATCCGCCTGGTCGCGACGGGGCAGACGGCGCTCTCGCCGGCTGTGGCGGCGCGGCTGGTGTCGCGGATGCGCGAGCCTGCGGCATCTGTCACGCTTACTCCGCGCGAGATCGAGGTCCTGCAGCTTGTGGCGCGTGGTCGCAGCAACAAGCTCATCGGCGCTGATCTCGGCATTGGCGAGTCGACGGTCAAGACCCACCTGCTGAAGATCTTCGACAAGCTCGAGGTCGCCGACCGAACCCACGCCGTGACGGTAGCCATGGAGCGCGGCATCCTCTAG
PROTEIN sequence
Length: 208
MIRLLIADDHPVVRAGLAGLFADEEGFEVVGQAADGAQAVELAAREKPDVVLMDLRMPVIDGVAATARIVAFGADAPRVLILTTYESDDQILAAIEAGAAGYLLKAAPQDEIVAGIRLVATGQTALSPAVAARLVSRMREPAASVTLTPREIEVLQLVARGRSNKLIGADLGIGESTVKTHLLKIFDKLEVADRTHAVTVAMERGIL*