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scnpilot_p_inoc_scaffold_321_23

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 22642..23613

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic [NiFe] hydrogenase small subunit {ECO:0000313|EMBL:KJL36254.1}; EC=1.12.2.1 {ECO:0000313|EMBL:KJL36254.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 307.0
  • Bit_score: 589
  • Evalue 3.80e-165
Putative NiFe-hydrogenase small subunit n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WCQ6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 323.0
  • Bit_score: 577
  • Evalue 6.20e-162
  • rbh
putative [NiFe] hydrogenase small subunit similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 323.0
  • Bit_score: 574
  • Evalue 1.90e-161

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGACCAGCGTGCTGTGGTTGCAGGGCGGGGCGTGTTCGGGGAACACGATGTCGTTCCTCAACGCGGATGAGCCGAGCGTGGTCGATCTCATCGTCGACTTCGGGCTTGAGATTCTCTGGCACCCGACGACGGGCCTTGAGATGGGCAAGAACGCCCAGAAGATCTTCAAGGACTGTGTCGAGGGCAAGCGCCAGCTCGACATCTTCGTGTTCGAGGGGACGGTGATCGAAGGCCCCGACGGCACGGGCCGCTTCGATATGTTCGCCGATCGACCCATGAAGGATTGGGTGACAGACCTTGCCGAGGCGGCATCCATCGTCGTGGCCATCGGCGACTGCGCGTGCTTCGGCGGTCTTCCCGCCGTCGCGCCCAACCCCAGTGACTCGACAGGTCTGCAGTTCCACCGCAAGGCCAAGGGCGGATTCCTCGGTGCCGACTGGCGCAGCAAGTCGGGACTTCCCGTCATCAACATCCCCGGCTGCCCCGCCCACCCCGACTGGATCACGCAGATCATCGTTGCGCTGGCCACGGGCCGCGTCGGAGACATCGCGCTCGACGACCTCAACCGGCCCCAGACCTTCTTCACCCAGTTCGTGCACAACGGCTGCACGCGCAACACGTTCTTCGAGTTCAAGCAGTCCACGATGAGCTTCGGGGAGGGCACGCGCACCGGATGTCTGTTCTATGAATTCGGATGCCGCGGGCCGATGACCCACGCGCCGTGCAACCGCATCCTGTGGAACCGCCAGTCATCCAAGACCCGCGCGGGCATGCCGTGCCTCGGGTGCACGGAACCCGAGTTCCCGTTCGCCGACCTGATGCCCGGCTCCGTCTTCAAGACGCAGCTGATCGCCGGCGCCATCCCGAAGGACCTCCCGCCCGGAGAGGACCACGTCACCTACATGGCCATGGCTGCCGCGGCGCGGATCTCCGCGCCCAAGTGGTCCAAAGAGGACATGTTCGTCGTCTAG
PROTEIN sequence
Length: 324
MTSVLWLQGGACSGNTMSFLNADEPSVVDLIVDFGLEILWHPTTGLEMGKNAQKIFKDCVEGKRQLDIFVFEGTVIEGPDGTGRFDMFADRPMKDWVTDLAEAASIVVAIGDCACFGGLPAVAPNPSDSTGLQFHRKAKGGFLGADWRSKSGLPVINIPGCPAHPDWITQIIVALATGRVGDIALDDLNRPQTFFTQFVHNGCTRNTFFEFKQSTMSFGEGTRTGCLFYEFGCRGPMTHAPCNRILWNRQSSKTRAGMPCLGCTEPEFPFADLMPGSVFKTQLIAGAIPKDLPPGEDHVTYMAMAAAARISAPKWSKEDMFVV*