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scnpilot_p_inoc_scaffold_461_1

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 2..2410

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI00030B4561 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 788.0
  • Bit_score: 898
  • Evalue 4.00e-258
Conjugal transfer protein {ECO:0000313|EMBL:EXJ52921.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 802.0
  • Bit_score: 1343
  • Evalue 0.0
conjugative relaxase domain protein, TrwC/TraI family similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 781.0
  • Bit_score: 892
  • Evalue 1.00e-256

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2409
GCCGTCGCGGTCGAGCCCGCGAAGCTCCTGCGCGCGGAGGATGTGCCGCTGGAGCGGATCGCCAGGCTCGGCGCGTCGGTGGTCGCCGCGGTTGCCGAGAAGCGCACGACGTGGAGCCACTGGAATCTCTACGCCGAGGCCGCACGCCAGACGATGGGCTGGCGCTTCACCGCCACCGAGGACCGCGAGGCGATCACGGGGATGGTCACCGACGCCGCGGAGCAGGCGTCCATCCGGCTCACGCCGCCCGAGCTGGCCTCCAGCCCCGCCGCGTTCCAGCGCGCGGACGGGACGAGCATGTTCCGCCCCCGCAACACCGCCCGCTACAGCGGTGCCGCGGTGCTCGCCGCCGAGGACCGTCTGCTTGCACGCTCCCGCGAGCAGGTTGCACCGCGCCTGGCCGACGCAACCATCGCGCACGCGCTGCAACCCCACCGTGGGCGCACGCTCGGCGACGACCAGCGCGCCGCGCTCGCAGCGATTGCGTCGTCGGGTCGGGTACTCGACCTGCTCGTCGGCCCTGCGGGGGCGGGGAAGACCACCGCGCTGCGCGCGCTGCGGCGTGCGTGGGAGGCCGAGCACGGGCGCGGCGCGGTCGTCGGTCTGGCACCGTCCGCGGTCGCGGCCGAGGTGCTGGCCGGTGACCTCGGCATCCCGACGGAGAACACCGCGAAGTGGTGGCAGACCCACCGCGACCACGGCACCGGGTTCACCGCCGGGCAGCTCGTGATCGTGGACGAGGCATCCCTCGCCGGGACGCTCGCGCTCGACCGGCTCGTGCGCGTCGCAGCCGACGCCGGAGCGAAGGTGCTGCTCGTGGGCGATCCCGCGCAACTCCAGTCCGTCGACGCCGGGGGAGCGTTCGGGATGCTCGTCGCCGACCGTGCCGACGTGCCCGAGTTGACCGACGTGCGCCGCATCACCGCAGCCTGGGAGAAGGGTGCCACCCGCGATCTACGCAACGGCCGCATCGAAGCCATCGACACCTACCAGGCCCACGGTCGTATCCGGGCGGGCGAAACCGAGCGCATGGCCGACGCCGCCTACGCCGCCTGGCAGCGCGACCGCGCGTTGGGGCTGGCGAGCATCCTCATTGCCGAGTCGAGCGCGATGGTCACCACCCTGAACCGGCGCGCCCGCGCCGACCTCATCCTCGCCGGGCAGGTCGACGCGCGCGCCGAGGTGCGGCTGCACGACTGCACCGAGGCGTCCGTCGGGGACGCGATCATCACCCGCCGCAACGACCGTGAACTGCGCACCGGACGCGGCTGGGTGCGCAACGGCAGCCGGTGGACGATCACCGCCATCGGCATCGACGGGTCGCTACGAGTGCGGCCTGCCGGGCGACGCGGAGGCGCGACGCTGCGACTCCCTGCCGGATACGTCGCCGAGCATGTCGAACTCGGCTACGCGGTCACCGCATACCGGGCGCAAGGAGTCACGGTCGACACCGGACACACGCTCATCGAGCCCGGCGCGACCCGCGAGAACTTCTACGTCGCCATGACCCGTGGCAAGGCCGGGAACTTCGCCTATGTCTCCCTCAACCGCCCCGATGATGACCACATTCACCCGCCCGCTCAGGACACCCTCGTGGTCGCGGCGCGCAAGGTGCTCGCCGGGGTGCTCCAGCACGTCGGCGCGGAACTCTCCGCCCGCCAGACGATCGCCGCCGAGCAGGATGTGTGGGGCTCGGTCGCGCAACTCGCCGCCGAATACGAGACCATCGCCGCCGCCGCGCAACAGCCACGGTGGGAGGCTCTGCTGCGAAGGACGCGGCTCACCGAGGCCGAGGCATCCGCAGCAATCGACTCGACCGCGTTCGGCGTGCTCAGCGCAGAGCTGCGCCGAGCCGAAGCCGACGGCTACGATGCCGAGCGCCTTCTGAGCGCTCTCGTCGCTTCTCGTCCGCTCAATGACGCGGGCGATGTGGCCGCGGTGCTCCACGAGCGGGTGATCCGCGCCCTGGAGCACACGAACGGCGCGGGGCGCGTGCGCCAGCCCGCCACGCCCATCGCCGGAGTCGTCACTCCCGCGCTCGGCCCGATGGACGACGATATGCGCAGCGCACTCCGTGAACGTGCCGCGCTCATCGAGCAGCGAGCAGATGCGCTCGTCACCGAGGCCGTCGAGTCCTCGGGGGAGTGGATCTCGGGACTCGGGATGGAACCCTCTGATCCGCAGCTCGCCGCACTTTGGCGACGCGAGGCACGCACCGTCGCGGCCTATCGCGACAAGTACGGCATCGCCGTGGCCAGGGGGCTCGGCCTTGTCGGCGATGATGCTTCGCAACGCGCAGACGCGGCACGAGCACGCGCCGCGACCCTTCGCGCGCAACAGCTCGCGGTACGCGCGGCAGAACCTGGACCGACCACCCGCAGTCTCAGGGTCGCTGGGCCGCGCCTGTAA
PROTEIN sequence
Length: 803
AVAVEPAKLLRAEDVPLERIARLGASVVAAVAEKRTTWSHWNLYAEAARQTMGWRFTATEDREAITGMVTDAAEQASIRLTPPELASSPAAFQRADGTSMFRPRNTARYSGAAVLAAEDRLLARSREQVAPRLADATIAHALQPHRGRTLGDDQRAALAAIASSGRVLDLLVGPAGAGKTTALRALRRAWEAEHGRGAVVGLAPSAVAAEVLAGDLGIPTENTAKWWQTHRDHGTGFTAGQLVIVDEASLAGTLALDRLVRVAADAGAKVLLVGDPAQLQSVDAGGAFGMLVADRADVPELTDVRRITAAWEKGATRDLRNGRIEAIDTYQAHGRIRAGETERMADAAYAAWQRDRALGLASILIAESSAMVTTLNRRARADLILAGQVDARAEVRLHDCTEASVGDAIITRRNDRELRTGRGWVRNGSRWTITAIGIDGSLRVRPAGRRGGATLRLPAGYVAEHVELGYAVTAYRAQGVTVDTGHTLIEPGATRENFYVAMTRGKAGNFAYVSLNRPDDDHIHPPAQDTLVVAARKVLAGVLQHVGAELSARQTIAAEQDVWGSVAQLAAEYETIAAAAQQPRWEALLRRTRLTEAEASAAIDSTAFGVLSAELRRAEADGYDAERLLSALVASRPLNDAGDVAAVLHERVIRALEHTNGAGRVRQPATPIAGVVTPALGPMDDDMRSALRERAALIEQRADALVTEAVESSGEWISGLGMEPSDPQLAALWRREARTVAAYRDKYGIAVARGLGLVGDDASQRADAARARAATLRAQQLAVRAAEPGPTTRSLRVAGPRL*