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scnpilot_p_inoc_scaffold_2129_12

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 9677..10084

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVX3_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 213
  • Evalue 1.30e-52
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 213
  • Evalue 3.60e-53
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA25458.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 213
  • Evalue 1.80e-52

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGCCTCCGACTCCCGACGAGCTTCGCGACTTCGTGCTCCTGCGCCGCGTCCGCGACCGCATCGACCGCGAGTACGCTGCGCCCCTGGATGTCGAGCAACTCGCGCGCGGCGCTCACATGTCAGCGGGGCACCTGAGCCGAAAGTTCAAGGCGGCATTCGGTGAGAGTCCGTACTCGTACCTCATGACCCGTCGGATCGAGCGCGCCATGACACTGCTGCGACGGGGAGATCTCAGCGTCACCGAGGTTTCCCTCGCCGTGGGCTGCGCGTCCCTCGGCACGTTCAGTACCCGGTTCACTGAGCTCGTCGGAATGCCGCCAAGCGTCTACCGGGCGCGCGCCGAACATGACGCGGCGGGCCTGATTCCCTGTGTCGCGAAGCAGGTCACGCGGCCGATTCGCCGCTGA
PROTEIN sequence
Length: 136
MPPTPDELRDFVLLRRVRDRIDREYAAPLDVEQLARGAHMSAGHLSRKFKAAFGESPYSYLMTRRIERAMTLLRRGDLSVTEVSLAVGCASLGTFSTRFTELVGMPPSVYRARAEHDAAGLIPCVAKQVTRPIRR*