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scnpilot_p_inoc_scaffold_2129_16

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 12351..13307

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S5K3_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 296.0
  • Bit_score: 270
  • Evalue 2.10e-69
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 296.0
  • Bit_score: 270
  • Evalue 5.90e-70
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADB75283.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophi similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 296.0
  • Bit_score: 270
  • Evalue 2.90e-69

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGGAGCCGCACGAAACGCACGCTGACCTCGAAGCACCGCGGGCGCTGCCGGCCCTCGACCCCCGGAGCATCCTGATCTTCCGTGAGGTCGGACGCACCGGGTCGCTCACCGGCGCCGCGCAGGTGCTCGGCTGGACCCAGCCTGCCGTGAGCCAGCACGTCCGTCGCCTCGAGGCTGCTGCCGGCGTTCCACTTCTCGCGCGCGAGGGACGCGGGGTCGTGGTGACGGATGCCGGGCGTGCCCTGCTGCGCCATGCCGACGCGCTCGCTGCGGCTCTGCAGGATGCCGAACACGAGCTCGCCGACCACGCGCACCTGCGTGCGGGCCGCGTGCGGATCGCATCCTTTCCCTCGGCCAGCGCGACGATCGCGGCGCGTGCCGTGAGCGACCTGGCTGAGAGATTCCCGGGGATCGACCTGCGGCTGGAACAGCTCGAACCACCAGAGGCTCTTCGCGCGCTCGAGGAAGGCGCGTGCGACATCGCGATCGTGTTCGAGTACGACGATGGGCACGTGTCGGTGCCGGTTGACGCTGACCGCACGCCGCTGGCCGTCGATCCGCTGCAGATCATCCTTCCCCCCGGGCATCCGCTGACGGCCCGAGCCGAGATCCGTCTCGACGATCTTGCCGACGAGCAGTGGGTTACCGGATGCATCAGCTGCCGCCGTCACCTGCTGACCTCGACCTCGGCCGCAGGGTTCACTCCCGACATCCGTCACAGCACCGATGATTACGTCGTCGTCCAGGCGCTGGTCGCGACGCGCATGGCAGTGGCAGTTCTTCCCTCCCTTGCCGTGCGGGCGAGCCGGAACCCGGACGTGACGGTCCACCCCCTCGCCGACCACGCCCCGCGCCGGGTCTCGGCGATCACCCGGCGAAGTGCCCGGTCAGTGCCGTCGGTCGGAGCAGCGCTCGCGGCGATTCAGCGGGCAGCACACGCACTGAACGCGCCGTGA
PROTEIN sequence
Length: 319
MEPHETHADLEAPRALPALDPRSILIFREVGRTGSLTGAAQVLGWTQPAVSQHVRRLEAAAGVPLLAREGRGVVVTDAGRALLRHADALAAALQDAEHELADHAHLRAGRVRIASFPSASATIAARAVSDLAERFPGIDLRLEQLEPPEALRALEEGACDIAIVFEYDDGHVSVPVDADRTPLAVDPLQIILPPGHPLTARAEIRLDDLADEQWVTGCISCRRHLLTSTSAAGFTPDIRHSTDDYVVVQALVATRMAVAVLPSLAVRASRNPDVTVHPLADHAPRRVSAITRRSARSVPSVGAALAAIQRAAHALNAP*