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scnpilot_p_inoc_scaffold_2248_8

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(5636..6277)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUJ3_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 203.0
  • Bit_score: 174
  • Evalue 1.40e-40
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 203.0
  • Bit_score: 174
  • Evalue 3.90e-41
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEA25383.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di similarity UNIPROT
DB: UniProtKB
  • Identity: 46.8
  • Coverage: 203.0
  • Bit_score: 174
  • Evalue 1.90e-40

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGCTTCTCGTGCTGGGCTTCCCCTGCGCGACGTGATTGCCGCCGCGATCCGGGGACGGATCATCGATGGCTCGTACGTTCCCGGCAGCCGGCTTCGCGAGGAGGAGATTGCTTCCGATTTCGACGTCTCCCGAGTACCCGTGCGCGAGGCCTTTCAGGTGCTGGAGCAGCAGCGCTTTCTCGAGTTGCGCAAATACAAGGGTGCAATAGTCGCCCAGCCCGAGTCATCGGGCACCCGCGAGCTCATCGCGATCCGCGCCGAACTCGAGGCGATGGCGGCGCGGCTTGCCGCGGCTGCCCACGGAGGGGCGATGGCACGCGAACTTCGATCTCTTACAGAAGAGGGCAGCACCCTCGACCCGGTGACCGAACCCGAGCGCCATTCGGAGCTGGTGGAGCGATTCCACGACACGGTGGCGATTGCTTCCGGAAATCGAGAACTCGTCGAGATGCTGAGGACGCTGCGCAGCCGCCTCAGTTGGATATTCGGAGCGGAGCTGGCTGCGCGCGCTGCCGGGTCGTGGGATGAGCATCGCGACATCTGCGCGTCGATTCTCGGCGGCGAGGAGGCCGCGGCTCATCTCATGCGCGAGCACGTCCTCGGCGACCTTGCGTTCTTCGACGAGCTCATCCGTCGCTGA
PROTEIN sequence
Length: 214
MASRAGLPLRDVIAAAIRGRIIDGSYVPGSRLREEEIASDFDVSRVPVREAFQVLEQQRFLELRKYKGAIVAQPESSGTRELIAIRAELEAMAARLAAAAHGGAMARELRSLTEEGSTLDPVTEPERHSELVERFHDTVAIASGNRELVEMLRTLRSRLSWIFGAELAARAAGSWDEHRDICASILGGEEAAAHLMREHVLGDLAFFDELIRR*