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scnpilot_p_inoc_scaffold_2088_12

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(10444..11124)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E193_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 218.0
  • Bit_score: 247
  • Evalue 1.00e-62
Transcriptional regulator {ECO:0000313|EMBL:KJC65068.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 218.0
  • Bit_score: 258
  • Evalue 1.10e-65
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 205.0
  • Bit_score: 199
  • Evalue 1.20e-48

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Taxonomy

Agreia bicolorata → Agreia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGTCTCCGCGCCGGCGTGAGAGCGAGCCGGGGCCGACCCAGGCTGCCGCCCTTGCCGAGGCGCTGCGCGCCAGCATCCTGTCGGGTGACCTGGACCTCGATGCACCGCTGCGAGAGGAGAACGTGGCAGAGCGGTACGGTGCGTCCCGCCATACGGTGCGCGCCGCGCTGCAGACGCTCGCGGCTGAACGTCTCGTGACGATCGAGCCCTATCGCGGAGCGCGCGTCGCAAACCTCGACAACGATGCGGTCGAAGCGCTCCAAGAGTTGCGCGGCGCGCTCGAGGCAGAAGCGGTGCGGCAGGTCAGCGCCAAGCACGGTGCGTCATGGCCGAATGCGGTCACTCGTCCCGTGGCTGAGGCCATCGACCGGCTCGCGCTGGCCGAGGCAGCCGGCGACTGGCTGGCTACGACCCGCGCCCATGCCGAGGTGCACCGGCTGATCGTCGAGGCAGCCGACAGTCCGCGGATCGCGCAGGCGCATCGCCAGCTCGAGTCCGAGATCCTTCTGTTGCTCACCCACGTCAAACCCGACTATCCGGCCGGTTCGCTCGCCCGAGAACACACCGCGTATCTCGATGAGGTGCAGCACGCCGGAGGAGAGGCGGTGCGGGCGCATCTGGCGCACTCGGCCGACCTCATCCGTGCCGCACGCTACCAGGCAGGCGCCGACCAGCCGTAG
PROTEIN sequence
Length: 227
MSPRRRESEPGPTQAAALAEALRASILSGDLDLDAPLREENVAERYGASRHTVRAALQTLAAERLVTIEPYRGARVANLDNDAVEALQELRGALEAEAVRQVSAKHGASWPNAVTRPVAEAIDRLALAEAAGDWLATTRAHAEVHRLIVEAADSPRIAQAHRQLESEILLLLTHVKPDYPAGSLAREHTAYLDEVQHAGGEAVRAHLAHSADLIRAARYQAGADQP*