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scnpilot_p_inoc_scaffold_6542_4

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 1850..2440

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigK n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363409D similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 196.0
  • Bit_score: 323
  • Evalue 1.30e-85
  • rbh
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:CDK01677.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 196.0
  • Bit_score: 313
  • Evalue 1.90e-82
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 194.0
  • Bit_score: 305
  • Evalue 1.00e-80

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Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGTGATCGACGGCATGGACGTGCCAGACGACGGGGCGGGCACCGTCGATCACGTCGCGGAGCTTCTCGAACGCATCGCGCGCGGTGATCACGAGGCTTTCGCGAGCCTCTACGACATGCTGTCGTCTCGGGTCTTCGGACTCATCCTGCGCGTCGTGGTCGACCGGTCGCAGAGCGAAGAAGTTCTGCAGGAGGTCTTCCTCGAGGTGTGGCAATCCGCCGCGCGCTTCGCTCCGAACAAAGGCCAGGGCAGATCCTGGGTGCTCACGATCGCACACCGCCGAGCCGTTGACCGCGTGCGGGCTTCGCAGGCGAGCGTCGATCGCGACATCCGGATCGGGTTCCGTGACATCGACGTCGCTCACGATGGCGTCGCCGAGCAGGCGGAACTGCGGATCGAGAGCCGACGAGTAACAGAAGCACTCACCGCCCTTCCCGAATCACAGCGCGAGGCCCTCACCCTCGCGTATTTCGGGGGTTACAGTCAGAGCGAGATTGCGGCGCTGGTGGGGGCGCCGCTCGGAACAGTGAAGACCCGGATGCGCGACGGCTTGTCGCGCCTGAGAGCAGAGATGGGGGTGGCCTCATGA
PROTEIN sequence
Length: 197
MVIDGMDVPDDGAGTVDHVAELLERIARGDHEAFASLYDMLSSRVFGLILRVVVDRSQSEEVLQEVFLEVWQSAARFAPNKGQGRSWVLTIAHRRAVDRVRASQASVDRDIRIGFRDIDVAHDGVAEQAELRIESRRVTEALTALPESQREALTLAYFGGYSQSEIAALVGAPLGTVKTRMRDGLSRLRAEMGVAS*