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scnpilot_p_inoc_scaffold_6542_6

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 3223..3861

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium yannicii RepID=UPI00037A2B1B similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 212.0
  • Bit_score: 343
  • Evalue 1.30e-91
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KEP74554.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 212.0
  • Bit_score: 338
  • Evalue 5.90e-90
DNA-directed RNA polymerase, beta subunit/140 kD subunit similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 211.0
  • Bit_score: 332
  • Evalue 6.50e-89

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
GTGAGTGACGACCCGCGGCCCTATCACAAGCCCGTCCGCAGACCTGCAGAGCTGTTCGACCGGCTGTTTGCTGCCGAAGATCCCGCAGAGGTCTCTCGCGTCGCCCACTCCACGGCGCAGGCGCTGCTCTCGCGCGTCCGTGCCAACCCCGACGATGCAGTTGTCGAGCGTTTGATCGCCTTCACTGCCGAGCACGGGATCGATGACATCGCAGAGCTGTGGTCGCGATCGCCCGCGAAGACCCTGCCCGGTGCGCTCTGGCGGCTTTACCTTGTGCAGCTCATGATCCATGACGACCCGATCACGGCGGCTTTGACCTACGAGCGGGGCCGCGCTGCCCTCGATACCGCGGACGCTCTGGTCGCCGGGGCGCCCGTGCCGGCAAGCCCTGACGAGCTCGTCACCCTCGTCGACACGATCCTGCGCGGGCTCTTCCGCGGTGACTTCGCCGTAGCTCTCGATCGCGCCGCCGCGTTCTGTCGGGTGCAGGCCGCGGGTGCCACGTACCTGGCTGACGACTACGACGCAACCGAGTCCGACCGCAGCGCAGCCTTCACCACCCGCGCGCTGCGTCTGAGTGACTACGCATCCGATCTGAGCGCCTGCGCGGCTCTCTGGCGCCGCGAATCCCTTACCTGA
PROTEIN sequence
Length: 213
VSDDPRPYHKPVRRPAELFDRLFAAEDPAEVSRVAHSTAQALLSRVRANPDDAVVERLIAFTAEHGIDDIAELWSRSPAKTLPGALWRLYLVQLMIHDDPITAALTYERGRAALDTADALVAGAPVPASPDELVTLVDTILRGLFRGDFAVALDRAAAFCRVQAAGATYLADDYDATESDRSAAFTTRALRLSDYASDLSACAALWRRESLT*