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scnpilot_p_inoc_scaffold_33

Search features with annotation key words

Displaying items 211-240 of 303 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_33_211
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

273550..273714
DNA (165bp) protein (55aa)
Sec-independent translocation protein mttA/Hcf106 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT2_NIAKG
sec-independent translocation protein mttA/Hcf106
twin-arginine translocation protein, TatA/E family subunit; K03116 sec-independent protein translocase protein TatA Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_33_212
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

273946..275235
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000360839C
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACU58832.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;
scnpilot_p_inoc_scaffold_33_213
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

275320..276321
DNA (1002bp) protein (334aa)
Nucleotidyl transferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA0_CHIPD
nucleotidyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACU64693.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_33_214
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

276332..277306
DNA (975bp) protein (325aa)
2-nitropropane dioxygenase NPD n=1 Tax=Niabella soli DSM 19437 RepID=H1NTB5_9SPHI
2-nitropropane dioxygenase
2-nitropropane dioxygenase {ECO:0000313|EMBL:AHF15600.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1
scnpilot_p_inoc_scaffold_33_215
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

277308..277721
DNA (414bp) protein (138aa)
Acyl-coenzyme A thioesterase PaaI n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NNJ0_9BACT
Thioesterase {ECO:0000313|EMBL:KIC91215.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627
hypothetical protein
scnpilot_p_inoc_scaffold_33_216
Capnocytophaga ochracea, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

277729..278163
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) RepID=C7M6N6_CAPOD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU92024.1}; TaxID=521097 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga ochr
scnpilot_p_inoc_scaffold_33_217
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

278173..278523
DNA (351bp) protein (117aa)
Translation initiation factor SUI1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFY6_CHIPD
translation initiation factor SUI1
Translation initiation factor SUI1 {ECO:0000313|EMBL:ACU57969.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitino
scnpilot_p_inoc_scaffold_33_218
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

278526..278972
DNA (447bp) protein (149aa)
Hydrolase, P-loop family n=2 Tax=Bacteroides RepID=E4VTQ3_BACFG
ATP/GTP hydrolase {ECO:0000313|EMBL:KER54920.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
putative ATP/GTP-binding transmembrane protein
scnpilot_p_inoc_scaffold_33_219
unknown

Not on your lists

279098..279382
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_220
unknown

Not on your lists

279435..279623
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_221
unknown

Not on your lists

comp(279728..279919)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_222
unknown

Not on your lists

comp(279957..280523)
DNA (567bp) protein (189aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_33_223
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

280624..281742
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBN4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH51308.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_33_224
Acinetobacter oleivorans, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281750..282352
DNA (603bp) protein (201aa)
membrane protein n=1 Tax=Dyella japonica RepID=UPI000317DC3F
Membrane protein {ECO:0000313|EMBL:KHN66147.1}; TaxID=1148157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter oleivorans.
membrane protein
scnpilot_p_inoc_scaffold_33_225
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

282569..283246
DNA (678bp) protein (226aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK27_CHIPD
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACU58368.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_p_inoc_scaffold_33_226
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(283491..284168)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH80_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM35161.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BA
neutral zinc metallopeptidase
scnpilot_p_inoc_scaffold_33_227
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

284374..286008
DNA (1635bp) protein (545aa)
ABC1 family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G400_9SPHI rbh
ABC1 family protein {ECO:0000313|EMBL:EEI90093.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacteriu
ABC transporter
scnpilot_p_inoc_scaffold_33_228
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(286038..286364)
DNA (327bp) protein (109aa)
UPF0060 membrane protein Murru_2463 n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PPK0_MURRD
membrane protein ynfA
UPF0060 membrane protein Murru_2463 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricaud
scnpilot_p_inoc_scaffold_33_229
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(286421..287350)
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1220578 species="
Methionyl-tRNA formyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKX9_CHIPD
methionyl-tRNA formyltransferase
scnpilot_p_inoc_scaffold_33_230
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

287543..289105
DNA (1563bp) protein (521aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACU63944.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACU63944.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacte
Carboxyl-terminal protease n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL34_CHIPD
carboxyl-terminal protease
scnpilot_p_inoc_scaffold_33_231
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

289117..289884
DNA (768bp) protein (256aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR01_NIAKG
TrmH family RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:AEV97900.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="N
scnpilot_p_inoc_scaffold_33_232
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

289895..290809
DNA (915bp) protein (305aa)
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_33_233
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

290811..291965
DNA (1155bp) protein (385aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.1) Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
metB; cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-lyase n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7X3S7_9BACT
scnpilot_p_inoc_scaffold_33_234
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

291988..294015
DNA (2028bp) protein (676aa)
OstA family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSS2_9SPHI
OstA family protein
Uncharacterized protein {ECO:0000313|EMBL:AHF18032.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_p_inoc_scaffold_33_235
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


294102..294500
DNA (399bp) protein (133aa)
30S ribosomal protein S6 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRF5_CHIPD
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_33_236
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


294805..295251
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRF7_CHIPD
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_33_237
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(296229..297071)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EDE65
Uncharacterized protein {ECO:0000313|EMBL:AHM61126.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
scnpilot_p_inoc_scaffold_33_238
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(297071..299374)
DNA (2304bp) protein (768aa)
TonB-dependent receptor n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2I7_SPHS2
Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78452.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
TonB-dependent receptor
scnpilot_p_inoc_scaffold_33_239
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(299394..304118)
DNA (4725bp) protein (1575aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEE2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63351.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_33_240
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

304342..305790
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DUJ7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOZ95766.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
Displaying items 211-240 of 303 in total

View Taxonomy