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scnpilot_p_inoc_scaffold_176

Search features with annotation key words

Displaying items 121-150 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_176_121
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(148265..149524)
DNA (1260bp) protein (420aa)
DNA repair protein RadA n=1 Tax=Segetibacter koreensis RepID=UPI0003782CDF
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis
scnpilot_p_inoc_scaffold_176_122
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(149910..151565)
DNA (1656bp) protein (552aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1463156 speci
Transcription termination factor Rho n=1 Tax=Niabella soli DSM 19437 RepID=H1NTZ1_9SPHI
transcription termination factor Rho
scnpilot_p_inoc_scaffold_176_123
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(151738..152817)
DNA (1080bp) protein (360aa)
Outer membrane insertion C-terminal signal n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCC6_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO43626.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
outer membrane insertion C-terminal signal
scnpilot_p_inoc_scaffold_176_124
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152842..153267)
DNA (426bp) protein (142aa)
methionine-R-sulfoxide reductase n=1 Tax=Riemerella columbina RepID=UPI00037EC763
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EKF56270.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter m
PilB-like protein
scnpilot_p_inoc_scaffold_176_125
unknown

Not on your lists

comp(153278..153793)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_126
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

154015..154860
DNA (846bp) protein (282aa)
Cell division protein FtsX n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ64_CHIPD
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_176_127
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

154879..155586
DNA (708bp) protein (236aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
Octanoyltransferase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMS6_RUNSL
Octanoyltransferase
scnpilot_p_inoc_scaffold_176_128
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

155625..156617
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBH9_9SPHI rbh
3-oxoacyl-ACP synthase
scnpilot_p_inoc_scaffold_176_129
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

156711..157217
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS21_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60815.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_176_130
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

157293..157628
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NSV5_ELIME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB93230.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
scnpilot_p_inoc_scaffold_176_131
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

158239..159261
DNA (1023bp) protein (341aa)
TQO small subunit DoxD domain-containing protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZNC1_9BACE rbh
TQO small subunit DoxD domain-containing protein {ECO:0000313|EMBL:EGJ71461.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacter
hypothetical protein
scnpilot_p_inoc_scaffold_176_132
unknown

Not on your lists

comp(159342..160190)
DNA (849bp) protein (283aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_133
unknown

Not on your lists

comp(160202..161041)
DNA (840bp) protein (280aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_176_134
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(161044..161526)
DNA (483bp) protein (161aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIN8_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW02891.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
scnpilot_p_inoc_scaffold_176_135
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(162123..162683)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZZM6_ORNRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL97160.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium
scnpilot_p_inoc_scaffold_176_136
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(162744..163508)
DNA (765bp) protein (255aa)
Methyltransferase type 11 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBN9_FLUTR rbh
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEA45365.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (st
scnpilot_p_inoc_scaffold_176_137
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

163961..164869
DNA (909bp) protein (303aa)
phosphatidylserine decarboxylase (EC:4.1.1.65) rbh
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
Phosphatidylserine decarboxylase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8B2_PEDSD rbh
scnpilot_p_inoc_scaffold_176_138
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

165096..166514
DNA (1419bp) protein (473aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=761193 species="Bacteria; Bacte
Fumarate hydratase class II n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHI0_RUNSL
class II fumarate hydratase
scnpilot_p_inoc_scaffold_176_139
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

166937..167923
DNA (987bp) protein (329aa)
Helix-turn-helix, type 11 domain-containing protein n=1 Tax=Imtechella halotolerans K1 RepID=I0W5J7_9FLAO rbh
Helix-turn-helix, type 11 domain-containing protein {ECO:0000313|EMBL:EID71663.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" sou
DNA-binding protein
scnpilot_p_inoc_scaffold_176_140
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(167946..168425)
DNA (480bp) protein (160aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihum
Ferroxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTZ0_CHIPD
ferroxidase
scnpilot_p_inoc_scaffold_176_141
Prevotella oulorum, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(168518..169351)
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Prevotella oulorum F0390 RepID=G1WD61_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EGV29955.1}; TaxID=702438 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oulorum F0390.;"
hypothetical protein
scnpilot_p_inoc_scaffold_176_142
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(169434..170573)
DNA (1140bp) protein (380aa)
Aminodeoxyfutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993}; Short=AFL synthase {ECO:0000256|HAMAP-Rule:MF_00993};; Short=Aminofutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993};; EC=2.5.1.120
Radical SAM domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLT6_CHIPD
radical SAM protein
scnpilot_p_inoc_scaffold_176_143
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

170986..171666
DNA (681bp) protein (227aa)
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYW7_DYAFD
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family {ECO:0000313|EMBL:ACT95173.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophaga
scnpilot_p_inoc_scaffold_176_144
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

171763..173739
DNA (1977bp) protein (659aa)
Succinate dehydrogenase {ECO:0000313|EMBL:KIC90019.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KIC90019.1};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE81_NIAKG
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
scnpilot_p_inoc_scaffold_176_145
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

173865..174614
DNA (750bp) protein (250aa)
succinate dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00035FEB29
Fumarate reductase {ECO:0000313|EMBL:KIC94949.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sol
succinate dehydrogenase and fumarate reductase iron-sulfur protein
scnpilot_p_inoc_scaffold_176_146
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(174723..175859)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FY05_9SPHI rbh
permease
Permease {ECO:0000313|EMBL:AIM38224.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W
scnpilot_p_inoc_scaffold_176_147
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(175899..176195)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036C14DD
TonB family protein {ECO:0000313|EMBL:CDD32181.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides
TonB family protein
scnpilot_p_inoc_scaffold_176_148
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

176797..182556
DNA (5760bp) protein (1920aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00035F34FA rbh
Uncharacterized protein {ECO:0000313|EMBL:EHO08438.1}; TaxID=883150 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CCU
Protein of unknown function DUF4011/DUF3320
scnpilot_p_inoc_scaffold_176_149
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

182566..182988
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HVD4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59240.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
hypothetical protein
scnpilot_p_inoc_scaffold_176_150
unknown

Not on your lists

comp(183401..184126)
DNA (726bp) protein (242aa)

This feature has no annotations

Displaying items 121-150 of 183 in total

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